Nuno Alberto Paulino da Fonseca


AuthID: R-000-DK8

Confirmed Publications: 119



61
TITLE: Predicting malignancy from mammography findings and image-guided core biopsies
AUTHORS: Pedro Ferreira ; Nuno A Fonseca ; Ines Dutra ; Ryan Woods; Elizabeth Burnside ;
PUBLISHED: 2015, SOURCE: INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, VOLUME: 11, ISSUE: 3
INDEXED IN: Scopus WOS DBLP CrossRef: 7
IN MY: ORCID | ResearcherID | DBLP
62
TITLE: AND Parallelism for ILP: The APIS System
AUTHORS: Rui Camacho ; Ruy Ramos; Nuno A Fonseca ;
PUBLISHED: 2014, SOURCE: 23rd International Conference on Inductive Logic Programming in INDUCTIVE LOGIC PROGRAMMING: 23RD INTERNATIONAL CONFERENCE, VOLUME: 8812
INDEXED IN: Scopus WOS DBLP CrossRef: 1
IN MY: ORCID | DBLP
63
TITLE: Expression Atlas update-a database of gene and transcript expression from microarray- and sequencing-based functional genomics experiments  Full Text
AUTHORS: Petryszak, R; Burdett, T; Fiorelli, B; Fonseca, NA ; Gonzalez Porta, M; Hastings, E; Huber, W; Jupp, S; Keays, M; Kryvych, N; McMurry, J; Marioni, JC; Malone, J; Megy, K; Rustici, G; Tang, AY; Taubert, J; Williams, E; Mannion, O; Parkinson, HE; Brazma, A; ...More
PUBLISHED: 2014, SOURCE: NUCLEIC ACIDS RESEARCH, VOLUME: 42, ISSUE: D1
INDEXED IN: Scopus WOS DBLP CrossRef: 251
IN MY: ORCID | ResearcherID | DBLP
64
TITLE: High-resolution mapping of transcriptional dynamics across tissue development reveals a stable mRNA-tRNA interface
AUTHORS: Schmitt, BM; Rudolph, KLM; Karagianni, P; Fonseca, NA ; White, RJ; Talianidis, L; Odom, DT; Marioni, JC; Kutter, C;
PUBLISHED: 2014, SOURCE: GENOME RESEARCH, VOLUME: 24, ISSUE: 11
INDEXED IN: Scopus WOS CrossRef: 78
IN MY: ORCID | ResearcherID
65
TITLE: iRAP - an integrated RNA-seq Analysis Pipeline
AUTHORS: Nuno A Fonseca ; Robert Petryszak; John Marioni; Alvis Brazma;
PUBLISHED: 2014
INDEXED IN: CrossRef: 23
IN MY: ORCID
66
TITLE: Long-range enhancers regulating Myc expression are required for normal facial morphogenesis  Full Text
AUTHORS: Veil Vural Uslu; Massimo Petretich; Sandra Ruf; Katja Langenfeld; Nuno A Fonseca ; John C Marioni; Francois Spitz;
PUBLISHED: 2014, SOURCE: NATURE GENETICS, VOLUME: 46, ISSUE: 7
INDEXED IN: Scopus WOS CrossRef: 107
IN MY: ORCID | ResearcherID
67
TITLE: RNA-Seq Gene Profiling - A Systematic Empirical Comparison  Full Text
AUTHORS: Fonseca, NA ; Marioni, J; Brazma, A;
PUBLISHED: 2014, SOURCE: PLOS ONE, VOLUME: 9, ISSUE: 9
INDEXED IN: Scopus WOS CrossRef: 67
IN MY: ORCID | ResearcherID
68
TITLE: Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species  Full Text
AUTHORS: Keith R Bradnam; Joseph N Fass; Anton Alexandrov; Paul Baranay; Michael Bechner; Inanc Birol; Sebastien Boisvert; Jarrod A Chapman; Guillaume Chapuis; Rayan Chikhi; Hamidreza Chitsaz; Wen Chi Chou; Jacques Corbeil; Cristian Del Fabbro; Roderick R Docking; Richard Durbin; Dent Earl; Scott Emrich; Pavel Fedotov; Nuno A Fonseca ; Ganeshkumar Ganapathy; Richard A Gibbs; Sante Gnerre; Elenie Godzaridis; Steve Goldstein; Matthias Haimel; Giles Hall; David Haussler; Joseph B Hiatt; Isaac Y Ho; Jason Howard; Martin Hunt; Shaun D Jackman; David B Jaffe; Erich D Jarvis; Huaiyang Jiang; Sergey Kazakov; Paul J Kersey; Jacob O Kitzman; James R Knight; Sergey Koren; Tak Wah Lam; Dominique Lavenier; Francois Laviolette; Yingrui R Li; Zhenyu Y Li; Binghang H Liu; Yue Liu; Ruibang Luo; Iain MacCallum; Matthew D MacManes; Nicolas Maillet; Sergey Melnikov; Delphine Naquin; Zemin Ning; Thomas D Otto; Benedict Paten; Octavio S Paulo; Adam M Phillippy; Francisco Pina Martins; Michael Place; Dariusz Przybylski; Xiang Qin; Carson Qu; Filipe J Ribeiro; Stephen Richards; Daniel S Rokhsar; Graham G Ruby; Simone Scalabrin; Michael C Schatz; David C Schwartz; Alexey Sergushichev; Ted Sharpe; Timothy I Shaw; Jay Shendure; Yujian J Shi; Jared T Simpson; Henry Song; Fedor Tsarev; Francesco Vezzi; Riccardo Vicedomini; Bruno M Vieira; Jun Wang; Kim C Worley; Shuangye Y Yin; Siu Ming Yiu; Jianying Y Yuan; Guojie J Zhang; Hao Zhang; Shiguo Zhou; Ian F Korf; ...More
PUBLISHED: 2013, SOURCE: GIGASCIENCE, VOLUME: 2, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 518
IN MY: ORCID | ResearcherID
69
TITLE: Boosting the Detection of Transposable Elements Using Machine Learning
AUTHORS: Loureiro, T; Camacho, R ; Vieira, J ; Fonseca, NA ;
PUBLISHED: 2013, SOURCE: Advances in Intelligent Systems and Computing, VOLUME: 222
INDEXED IN: Scopus DBLP CrossRef: 7
IN MY: ORCID | ResearcherID | DBLP
70
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