Rui Manuel Vieira Reis
AuthID: R-000-FZ3
261
TITLE: An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics
AUTHORS: Jianfang Liu; Tara Lichtenberg; Katherine A Hoadley; Laila M Poisson; Alexander J Lazar; Andrew D Cherniack; Albert J Kovatich; Christopher C Benz; Douglas A Levine; Adrian V Lee; Larsson Omberg; Denise M Wolf; Craig D Shriver; Vesteinn Thorsson; Hai Hu; Samantha J Caesar-Johnson; John A Demchok; Ina Felau; Melpomeni Kasapi; Martin L Ferguson; ...More
PUBLISHED: 2018, SOURCE: Cell, VOLUME: 173, ISSUE: 2
AUTHORS: Jianfang Liu; Tara Lichtenberg; Katherine A Hoadley; Laila M Poisson; Alexander J Lazar; Andrew D Cherniack; Albert J Kovatich; Christopher C Benz; Douglas A Levine; Adrian V Lee; Larsson Omberg; Denise M Wolf; Craig D Shriver; Vesteinn Thorsson; Hai Hu; Samantha J Caesar-Johnson; John A Demchok; Ina Felau; Melpomeni Kasapi; Martin L Ferguson; ...More
PUBLISHED: 2018, SOURCE: Cell, VOLUME: 173, ISSUE: 2
262
TITLE: A Pan-Cancer Analysis of Enhancer Expression in Nearly 9000 Patient Samples
AUTHORS: Han Chen; Chunyan Li; Xinxin Peng; Zhicheng Zhou; John N Weinstein; Han Liang; Samantha J Caesar-Johnson; John A Demchok; Ina Felau; Melpomeni Kasapi; Martin L Ferguson; Carolyn M Hutter; Heidi J Sofia; Roy Tarnuzzer; Zhining Wang; Liming Yang; Jean C Zenklusen; Jiashan (Julia) Zhang; Sudha Chudamani; Jia Liu; ...More
PUBLISHED: 2018, SOURCE: Cell, VOLUME: 173, ISSUE: 2
AUTHORS: Han Chen; Chunyan Li; Xinxin Peng; Zhicheng Zhou; John N Weinstein; Han Liang; Samantha J Caesar-Johnson; John A Demchok; Ina Felau; Melpomeni Kasapi; Martin L Ferguson; Carolyn M Hutter; Heidi J Sofia; Roy Tarnuzzer; Zhining Wang; Liming Yang; Jean C Zenklusen; Jiashan (Julia) Zhang; Sudha Chudamani; Jia Liu; ...More
PUBLISHED: 2018, SOURCE: Cell, VOLUME: 173, ISSUE: 2
263
TITLE: Comprehensive Characterization of Cancer Driver Genes and Mutations
AUTHORS: Matthew H Bailey; Collin Tokheim; Eduard Porta-Pardo; Sohini Sengupta; Denis Bertrand; Amila Weerasinghe; Antonio Colaprico; Michael C Wendl; Jaegil Kim; Brendan Reardon; Patrick Kwok-Shing Ng; Kang Jin Jeong; Song Cao; Zixing Wang; Jianjiong Gao; Qingsong Gao; Fang Wang; Eric Minwei Liu; Loris Mularoni; Carlota Rubio-Perez; ...More
PUBLISHED: 2018, SOURCE: Cell, VOLUME: 173, ISSUE: 2
AUTHORS: Matthew H Bailey; Collin Tokheim; Eduard Porta-Pardo; Sohini Sengupta; Denis Bertrand; Amila Weerasinghe; Antonio Colaprico; Michael C Wendl; Jaegil Kim; Brendan Reardon; Patrick Kwok-Shing Ng; Kang Jin Jeong; Song Cao; Zixing Wang; Jianjiong Gao; Qingsong Gao; Fang Wang; Eric Minwei Liu; Loris Mularoni; Carlota Rubio-Perez; ...More
PUBLISHED: 2018, SOURCE: Cell, VOLUME: 173, ISSUE: 2
264
TITLE: Pathogenic Germline Variants in 10,389 Adult Cancers
AUTHORS: Kuan-lin Huang; Jay J Mashl; Yige Wu; Deborah I Ritter; Jiayin Wang; Clara Oh; Marta Paczkowska; Sheila Reynolds; Matthew A Wyczalkowski; Ninad Oak; Adam D Scott; Michal Krassowski; Andrew D Cherniack; Kathleen E Houlahan; Reyka Jayasinghe; Liang-Bo Wang; Daniel Cui Zhou; Di Liu; Song Cao; Young Won Kim; ...More
PUBLISHED: 2018, SOURCE: Cell, VOLUME: 173, ISSUE: 2
AUTHORS: Kuan-lin Huang; Jay J Mashl; Yige Wu; Deborah I Ritter; Jiayin Wang; Clara Oh; Marta Paczkowska; Sheila Reynolds; Matthew A Wyczalkowski; Ninad Oak; Adam D Scott; Michal Krassowski; Andrew D Cherniack; Kathleen E Houlahan; Reyka Jayasinghe; Liang-Bo Wang; Daniel Cui Zhou; Di Liu; Song Cao; Young Won Kim; ...More
PUBLISHED: 2018, SOURCE: Cell, VOLUME: 173, ISSUE: 2
265
TITLE: Machine Learning Identifies Stemness Features Associated with Oncogenic Dedifferentiation
AUTHORS: Tathiane M Malta; Artem Sokolov; Andrew J Gentles; Tomasz Burzykowski; Laila Poisson; John N Weinstein; Bożena Kamińska; Joerg Huelsken; Larsson Omberg; Olivier Gevaert; Antonio Colaprico; Patrycja Czerwińska; Sylwia Mazurek; Lopa Mishra; Holger Heyn; Alex Krasnitz; Andrew K Godwin; Alexander J Lazar; Joshua M Stuart; Katherine A Hoadley; ...More
PUBLISHED: 2018, SOURCE: Cell, VOLUME: 173, ISSUE: 2
AUTHORS: Tathiane M Malta; Artem Sokolov; Andrew J Gentles; Tomasz Burzykowski; Laila Poisson; John N Weinstein; Bożena Kamińska; Joerg Huelsken; Larsson Omberg; Olivier Gevaert; Antonio Colaprico; Patrycja Czerwińska; Sylwia Mazurek; Lopa Mishra; Holger Heyn; Alex Krasnitz; Andrew K Godwin; Alexander J Lazar; Joshua M Stuart; Katherine A Hoadley; ...More
PUBLISHED: 2018, SOURCE: Cell, VOLUME: 173, ISSUE: 2
266
TITLE: Oncogenic Signaling Pathways in The Cancer Genome Atlas
AUTHORS: Francisco Sanchez-Vega; Marco Mina; Joshua Armenia; Walid K Chatila; Augustin Luna; Konnor C La; Sofia Dimitriadoy; David L Liu; Havish S Kantheti; Sadegh Saghafinia; Debyani Chakravarty; Foysal Daian; Qingsong Gao; Matthew H Bailey; Wen-Wei Liang; Steven M Foltz; Ilya Shmulevich; Li Ding; Zachary Heins; Angelica Ochoa; ...More
PUBLISHED: 2018, SOURCE: Cell, VOLUME: 173, ISSUE: 2
AUTHORS: Francisco Sanchez-Vega; Marco Mina; Joshua Armenia; Walid K Chatila; Augustin Luna; Konnor C La; Sofia Dimitriadoy; David L Liu; Havish S Kantheti; Sadegh Saghafinia; Debyani Chakravarty; Foysal Daian; Qingsong Gao; Matthew H Bailey; Wen-Wei Liang; Steven M Foltz; Ilya Shmulevich; Li Ding; Zachary Heins; Angelica Ochoa; ...More
PUBLISHED: 2018, SOURCE: Cell, VOLUME: 173, ISSUE: 2
267
TITLE: Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics
AUTHORS: Li Ding; Matthew H Bailey; Eduard Porta-Pardo; Vesteinn Thorsson; Antonio Colaprico; Denis Bertrand; David L Gibbs; Amila Weerasinghe; Kuan-lin Huang; Collin Tokheim; Isidro Cortés-Ciriano; Reyka Jayasinghe; Feng Chen; Lihua Yu; Sam Sun; Catharina Olsen; Jaegil Kim; Alison M Taylor; Andrew D Cherniack; Rehan Akbani; ...More
PUBLISHED: 2018, SOURCE: Cell, VOLUME: 173, ISSUE: 2
AUTHORS: Li Ding; Matthew H Bailey; Eduard Porta-Pardo; Vesteinn Thorsson; Antonio Colaprico; Denis Bertrand; David L Gibbs; Amila Weerasinghe; Kuan-lin Huang; Collin Tokheim; Isidro Cortés-Ciriano; Reyka Jayasinghe; Feng Chen; Lihua Yu; Sam Sun; Catharina Olsen; Jaegil Kim; Alison M Taylor; Andrew D Cherniack; Rehan Akbani; ...More
PUBLISHED: 2018, SOURCE: Cell, VOLUME: 173, ISSUE: 2
268
TITLE: Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer
AUTHORS: Katherine A Hoadley; Christina Yau; Toshinori Hinoue; Denise M Wolf; Alexander J Lazar; Esther Drill; Ronglai Shen; Alison M Taylor; Andrew D Cherniack; Vésteinn Thorsson; Rehan Akbani; Reanne Bowlby; Christopher K Wong; Maciej Wiznerowicz; Francisco Sanchez-Vega; Gordon G Robertson; Barbara G Schneider; Michael S Lawrence; Houtan Noushmehr; Tathiane M Malta; ...More
PUBLISHED: 2018, SOURCE: Cell, VOLUME: 173, ISSUE: 2
AUTHORS: Katherine A Hoadley; Christina Yau; Toshinori Hinoue; Denise M Wolf; Alexander J Lazar; Esther Drill; Ronglai Shen; Alison M Taylor; Andrew D Cherniack; Vésteinn Thorsson; Rehan Akbani; Reanne Bowlby; Christopher K Wong; Maciej Wiznerowicz; Francisco Sanchez-Vega; Gordon G Robertson; Barbara G Schneider; Michael S Lawrence; Houtan Noushmehr; Tathiane M Malta; ...More
PUBLISHED: 2018, SOURCE: Cell, VOLUME: 173, ISSUE: 2
269
TITLE: A Comprehensive Pan-Cancer Molecular Study of Gynecologic and Breast Cancers
AUTHORS: Ashton C Berger; Anil Korkut; Rupa S Kanchi; Apurva M Hegde; Walter Lenoir; Wenbin Liu; Yuexin Liu; Huihui Fan; Hui Shen; Visweswaran Ravikumar; Arvind Rao; Andre Schultz; Xubin Li; Pavel Sumazin; Cecilia Williams; Pieter Mestdagh; Preethi H Gunaratne; Christina Yau; Reanne Bowlby; Gordon G Robertson; ...More
PUBLISHED: 2018, SOURCE: Cancer Cell, VOLUME: 33, ISSUE: 4
AUTHORS: Ashton C Berger; Anil Korkut; Rupa S Kanchi; Apurva M Hegde; Walter Lenoir; Wenbin Liu; Yuexin Liu; Huihui Fan; Hui Shen; Visweswaran Ravikumar; Arvind Rao; Andre Schultz; Xubin Li; Pavel Sumazin; Cecilia Williams; Pieter Mestdagh; Preethi H Gunaratne; Christina Yau; Reanne Bowlby; Gordon G Robertson; ...More
PUBLISHED: 2018, SOURCE: Cancer Cell, VOLUME: 33, ISSUE: 4
270
TITLE: The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma
AUTHORS: Christopher J Ricketts; Aguirre A De Cubas; Huihui Fan; Christof C Smith; Martin Lang; Ed Reznik; Reanne Bowlby; Ewan A Gibb; Rehan Akbani; Rameen Beroukhim; Donald P Bottaro; Toni K Choueiri; Richard A Gibbs; Andrew K Godwin; Scott Haake; Ari A Hakimi; Elizabeth P Henske; James J Hsieh; Thai H Ho; Rupa S Kanchi; ...More
PUBLISHED: 2018, SOURCE: Cell Reports, VOLUME: 23, ISSUE: 1
AUTHORS: Christopher J Ricketts; Aguirre A De Cubas; Huihui Fan; Christof C Smith; Martin Lang; Ed Reznik; Reanne Bowlby; Ewan A Gibb; Rehan Akbani; Rameen Beroukhim; Donald P Bottaro; Toni K Choueiri; Richard A Gibbs; Andrew K Godwin; Scott Haake; Ari A Hakimi; Elizabeth P Henske; James J Hsieh; Thai H Ho; Rupa S Kanchi; ...More
PUBLISHED: 2018, SOURCE: Cell Reports, VOLUME: 23, ISSUE: 1