41
TITLE: Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable
AUTHORS: Mavian, C; Pond, SK; Marini, S; Magalis, BR; Vandamme, AM; Dellicour, S; Scarpino, SV; Houldcroft, C; Villabona Arenas, J; Paisie, TK; Trovao, NS; Boucher, C; Zhang, Y; Scheuermann, RH; Gascuel, O; Lam, TTY; Suchard, MA; Abecasis, A; Wilkinson, E; de Oliveira, TD; Bento, AI; Schmidt, HA; Martin, D; Hadfield, J; Faria, N; Grubaugh, ND; Neher, RA; Baele, G; Lemey, P; Stadler, T; Albert, J; Crandall, KA; Leitner, T; Stamatakis, A; Prosperi, M; Salemi, M; ...More
PUBLISHED: 2020, SOURCE: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, VOLUME: 117, ISSUE: 23
INDEXED IN: Scopus WOS CrossRef: 63
IN MY: ORCID
43
TITLE: Increasing Prevalence of HIV-1 Transmitted Drug Resistance in Portugal: Implications for First Line Treatment Recommendations
AUTHORS: Pingarilho, M; Pimentel, V; Diogo, I; Fernandes, S; Miranda, M; Pineda Pena, A; Libin, P; Theys, K; Martins, MRO; Vandamme, AM; Camacho, R; Gomes, P; Abecasis, A;
PUBLISHED: 2020, SOURCE: VIRUSES-BASEL, VOLUME: 12, ISSUE: 11
INDEXED IN: Scopus WOS CrossRef: 5
IN MY: ORCID
44
TITLE: Towards a Phylogenetic Measure to Quantify HIV Incidence
AUTHORS: Libin, P; Versbraegen, N; Abecasis, AB; Gomes, P; Lenaerts, T; Nowé, A;
PUBLISHED: 2020, SOURCE: 31st Benelux Conference on Artificial Intelligence, BNAIC 2019 and 28th Belgian Dutch Machine Learning Conference, BENELEARN 2019 in Communications in Computer and Information Science, VOLUME: 1196
INDEXED IN: Scopus CrossRef
IN MY: ORCID
45
TITLE: Increasing prevalence of HIV-1 Transmitted Drug Resistance in Portugal: implications for first line treatment recommendations
AUTHORS: Marta Pingarilho; Victor Pimentel; Isabel Diogo; Sandra Fernandes; Mafalda Miranda; Andrea Pineda-Pena; Pieter Libin; Kristof Theys; Rosário R O Martins; Anne-Mieke Vandamme; Ricardo Camacho; Perpétua Gomes; Ana Abecasis;
PUBLISHED: 2020
INDEXED IN: CrossRef: 6
IN MY: ORCID
46
TITLE: Determinants of HIV-1 late presentation in a cohort of Portuguese HIV-1 patients
AUTHORS: Ana Cláudia Miranda; Mafalda Miranda; Marta Pingarilho; Victor Pimentel; João Torres; Susana Peres; Teresa Baptista Alberto; Perpetua Gomes; Ana Abecasis; Kamal Mansinho;
PUBLISHED: 2020
INDEXED IN: CrossRef
IN MY: ORCID
47
TITLE: Tuberculosis care for migrant patients in Portugal: a mixed methods study with primary healthcare providers  Full Text
AUTHORS: Tavares, AM; Garcia, AC; Gama, A; Abecasis, AB; Miguel Viveiros ; Dias, S;
PUBLISHED: 2019, SOURCE: BMC HEALTH SERVICES RESEARCH, VOLUME: 19, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef Handle
IN MY: ORCID
48
TITLE: Geographic dispersal and genetic diversity of tick-borne phleboviruses (Phenuiviridae, Phlebovirus) as revealed by the analysis of L segment sequences  Full Text
AUTHORS: Pimentel, V; Afonso, R; Nunes, M; Vieira, ML; Bravo Barriga, D; Frontera, E; Martinez, M; Pereira, A; Maia, C; Paiva Cardoso, MD; Freitas, FB; Abecasis, AB; Parreira, R;
PUBLISHED: 2019, SOURCE: TICKS AND TICK-BORNE DISEASES, VOLUME: 10, ISSUE: 4
INDEXED IN: Scopus WOS CrossRef: 11
IN MY: ORCID
49
TITLE: Characterization of a large cluster of HIV-1 A1 infections detected in Portugal and connected to several Western European countries
AUTHORS: Araujo, PMM; Carvalho, A; Pingarilho, M; Abecasis, AB; Osorio, NS; Faria, D; Pinho, R; Ferreira, J; Proencc, P; Nunes, S; Mouro, M; Teofilo, E; Pinheiro, S; Maltez, F; Manata, MJ; Germano, I; Simoes, J; Costa, O; Corte Real, R; Diniz, A; Serrado, M; Caldeira, L; Janeiro, N; Gaiao, G; Cristino, JM; Mansinho, K; Baptista, T; Gomes, P; Diogo, I; Serrao, R; Pinheiro, C; Koch, C; Monteiro, F; Goncalves, MJ; Castro, RSE; Ramos, H; Oliveira, J; da Cunha, JS; Mota, V; Rodrigues, F; Tavares, R; Silva, AR; Roxo, F; Ivo, MS; Pocas, J; Ascencao, B; Pacheco, P; Caixeiro, M; Marques, N; Aleixo, MJ; Faria, T; da Silva, EG; de Abreu, RC; Neves, I; ...More
PUBLISHED: 2019, SOURCE: SCIENTIFIC REPORTS, VOLUME: 9
INDEXED IN: WOS Handle
50
TITLE: Characterization of a large cluster of HIV-1 A1 infections detected in Portugal and connected to several Western European countries
AUTHORS: Araújo, PMM; Carvalho, A; Pingarilho, M; Faria, D; Pinho, R; Ferreira, J; Proença, P; Nunes, S; Mouro, M; Teófilo, E; Pinheiro, S; Maltez, F; Manata, MJ; Germano, I; Simões, J; Costa, O; Corte Real, R; Diniz, A; Serrado, M; Caldeira, L; Janeiro, N; Gaião, G; Cristino, JM; Mansinho, K; Baptista, T; Gomes, P; Diogo, I; Serrão, R; Pinheiro, C; Koch, C; Monteiro, F; Gonçalves, MJ; Castro, RS; Ramos, H; Oliveira, J; da Cunha, JS; Mota, V; Rodrigues, F; Tavares, R; Silva, AR; Roxo, F; Ivo, MS; Poças, J; Ascenção, B; Pacheco, P; Caixeiro, M; Marques, N; Aleixo, MJ; Faria, T; da Silva, EG; de Abreu, RC; Neves, I; Abecasis, AB; Osório, NS; ...More
PUBLISHED: 2019, SOURCE: Scientific Reports, VOLUME: 9, ISSUE: 1
INDEXED IN: Scopus CrossRef: 12 Handle
IN MY: ORCID
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