51
TITLE: VIRULIGN: fast codon-correct alignment and annotation of viral genomes
AUTHORS: Libin, PJK; Deforche, K; Abecasis, AB; Theys, K;
PUBLISHED: 2019, SOURCE: BIOINFORMATICS, VOLUME: 35, ISSUE: 10
INDEXED IN: Scopus WOS CrossRef: 50
IN MY: ORCID
52
TITLE: A computational method for the identification of Dengue, Zika and Chikungunya virus species and genotypes
AUTHORS: Fonseca, V; Libin, PJK; Theys, K; Faria, NR; Nunes, MRT; Restovic, MI; Freire, M; Giovanetti, M; Cuypers, L; Nowe, A; Abecasis, A; Deforche, K; Santiago, GA; de Siqueira, IC; San, EJ; Machado, KCB; Azevedo, V; Bispo de Filippis, AM; da Cunha, RV; Pybus, OG; Vandamme, AM; Alcantara, LCJ; de Oliveira, T; ...More
PUBLISHED: 2019, SOURCE: PLOS NEGLECTED TROPICAL DISEASES, VOLUME: 13, ISSUE: 5
INDEXED IN: Scopus WOS CrossRef: 53
IN MY: ORCID
53
TITLE: Tracing the Impact of Public Health Interventions on HIV-1 Transmission in Portugal Using Molecular Epidemiology
AUTHORS: Vasylyeva, TI; du Plessis, L; Pineda Pena, AC; Kuhnert, D; Lemey, P; Vandamme, AM; Gomes, P; Camacho, RJ; Pybus, OG; Abecasis, AB; Faria, NR;
PUBLISHED: 2019, SOURCE: JOURNAL OF INFECTIOUS DISEASES, VOLUME: 220, ISSUE: 2
INDEXED IN: Scopus WOS CrossRef: 21
IN MY: ORCID
54
TITLE: An Evolutionary Model-Based Approach To Quantify the Genetic Barrier to Drug Resistance in Fast-Evolving Viruses and Its Application to HIV-1 Subtypes and Integrase Inhibitors
AUTHORS: Theys, K; Libin, PJK; Van Laethem, K; Abecasis, AB;
PUBLISHED: 2019, SOURCE: ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, VOLUME: 63, ISSUE: 8
INDEXED IN: Scopus WOS CrossRef: 10
IN MY: ORCID
55
TITLE: Drivers of HIV-1 transmission: The Portuguese case
AUTHORS: Pineda Peña, AC; Pingarilho, M; Li, G; Vrancken, B; Libin, P; Gomes, P; Camacho, RJ; Theys, K; Abecasis, AB;
PUBLISHED: 2019, SOURCE: PLoS ONE, VOLUME: 14, ISSUE: 9
INDEXED IN: Scopus CrossRef: 10
IN MY: ORCID
56
TITLE: Phylogeography and invasion history of Aedes aegypti, the Dengue and Zika mosquito vector in Cape Verde islands (West Africa)  Full Text
AUTHORS: Salgueiro, P; Serrano, C; Gomes, B; Alves, J; Sousa, CA; Abecasis, A; Pinto, J;
PUBLISHED: 2019, SOURCE: EVOLUTIONARY APPLICATIONS, VOLUME: 12, ISSUE: 9
INDEXED IN: Scopus WOS CrossRef: 18
IN MY: ORCID
57
TITLE: Towards a phylogenetic measure to quantify HIV incidence
AUTHORS: Libin, P; Versbraegen, N; Abecasis, AB; Gomes, P; Lenaerts, T; Nowé, A;
PUBLISHED: 2019, SOURCE: 31st Benelux Conference on Artificial Intelligence and the 28th Belgian Dutch Conference on Machine Learning, BNAIC/BENELEARN 2019 in CEUR Workshop Proceedings, VOLUME: 2491
INDEXED IN: Scopus
IN MY: ORCID
59
TITLE: Drivers of HIV-1 transmission: the Portuguese case
AUTHORS: Andrea-Clemencia Pineda-Peña; Marta Pingarilho; Guangdi Li; Bram Vrancken; Pieter Libin; Perpetua Gomes; Ricardo Jorge Camacho; Kristof Theys; Ana Barroso Abecasis;
PUBLISHED: 2019
INDEXED IN: CrossRef: 2
IN MY: ORCID
60
TITLE: An updated genotype classification system for Zika viruses
AUTHORS: Hanna Nebenzahl-Guimaraes; Pieter Libin; Victor Pimentel; Marta Pingarilho; Kristof Theys; Ana B Abecasis;
PUBLISHED: 2019
INDEXED IN: CrossRef
IN MY: ORCID
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