Carlos Daniel Moutinho Machado
AuthID: R-000-QBJ
1
TITLE: A benchmark of optimization solvers for genome-scale metabolic modeling of organisms and communities
AUTHORS: Daniel Machado;
PUBLISHED: 2024, SOURCE: mSystems, VOLUME: 9, ISSUE: 2
AUTHORS: Daniel Machado;
PUBLISHED: 2024, SOURCE: mSystems, VOLUME: 9, ISSUE: 2
2
TITLE: A benchmark of optimization solvers for genome-scale metabolic modeling
AUTHORS: Daniel Machado;
PUBLISHED: 2023
AUTHORS: Daniel Machado;
PUBLISHED: 2023
3
TITLE: Microbial interactions shape cheese flavour formation
AUTHORS: Chrats Melkonian; Francisco Zorrilla; Inge Kjærbølling; Sonja Blasche; Daniel Machado; Mette Junge; Kim Ib Sørensen; Lene Tranberg Andersen; Kiran R Patil; Ahmad A Zeidan;
PUBLISHED: 2023, SOURCE: Nature Communications, VOLUME: 14, ISSUE: 1
AUTHORS: Chrats Melkonian; Francisco Zorrilla; Inge Kjærbølling; Sonja Blasche; Daniel Machado; Mette Junge; Kim Ib Sørensen; Lene Tranberg Andersen; Kiran R Patil; Ahmad A Zeidan;
PUBLISHED: 2023, SOURCE: Nature Communications, VOLUME: 14, ISSUE: 1
4
TITLE: Is Web Browsing Secure? Assessment from an End-User Perspective
AUTHORS: Ramires, Moises; Machado, Carlos; Gomes, Antonio; Carvalho, Paulo; Lima, Solange Rito;
PUBLISHED: 2022, SOURCE: World Conference on Information Systems and Technologies (WorldCIST) in INFORMATION SYSTEMS AND TECHNOLOGIES, WORLDCIST 2022, VOL 1, VOLUME: 468
AUTHORS: Ramires, Moises; Machado, Carlos; Gomes, Antonio; Carvalho, Paulo; Lima, Solange Rito;
PUBLISHED: 2022, SOURCE: World Conference on Information Systems and Technologies (WorldCIST) in INFORMATION SYSTEMS AND TECHNOLOGIES, WORLDCIST 2022, VOL 1, VOLUME: 468
INDEXED IN: 
Scopus 
WOS
Scopus WOS5
TITLE: Metabolic memory underlying minimal residual disease in breast cancer
AUTHORS: Ksenija Radic Shechter; Eleni Kafkia; Katharina Zirngibl; Sylwia Gawrzak; Ashna Alladin; Daniel Machado; Christian Lüchtenborg; Daniel C Sévin; Britta Brügger; Kiran R Patil; Martin Jechlinger;
PUBLISHED: 2021, SOURCE: Molecular Systems Biology, VOLUME: 17, ISSUE: 10
AUTHORS: Ksenija Radic Shechter; Eleni Kafkia; Katharina Zirngibl; Sylwia Gawrzak; Ashna Alladin; Daniel Machado; Christian Lüchtenborg; Daniel C Sévin; Britta Brügger; Kiran R Patil; Martin Jechlinger;
PUBLISHED: 2021, SOURCE: Molecular Systems Biology, VOLUME: 17, ISSUE: 10
6
TITLE: Benchmarking kinetic models ofEscherichia colimetabolism
AUTHORS: Denis Shepelin; Daniel Machado; Lars K Nielsen; Markus J Herrgård;
PUBLISHED: 2020
AUTHORS: Denis Shepelin; Daniel Machado; Lars K Nielsen; Markus J Herrgård;
PUBLISHED: 2020
7
TITLE: Oncogenic memory underlying minimal residual disease in breast cancer
AUTHORS: Ksenija Radic Shechter; Eleni Kafkia; Katharina Zirngibl; Sylwia Gawrzak; Ashna Alladin; Daniel Machado; Christian Lüchtenborg; Daniel C Sévin; Britta Brügger; Kiran R Patil; Martin Jechlinger;
PUBLISHED: 2020
AUTHORS: Ksenija Radic Shechter; Eleni Kafkia; Katharina Zirngibl; Sylwia Gawrzak; Ashna Alladin; Daniel Machado; Christian Lüchtenborg; Daniel C Sévin; Britta Brügger; Kiran R Patil; Martin Jechlinger;
PUBLISHED: 2020
8
TITLE: Polarization of microbial communities between competitive and cooperative metabolism
AUTHORS: Daniel Machado; Oleksandr M Maistrenko; Sergej Andrejev; Yongkyu Kim; Peer Bork; Kaustubh R Patil; Kiran R Patil;
PUBLISHED: 2020
AUTHORS: Daniel Machado; Oleksandr M Maistrenko; Sergej Andrejev; Yongkyu Kim; Peer Bork; Kaustubh R Patil; Kiran R Patil;
PUBLISHED: 2020
9
TITLE: Linking genetic, metabolic, and phenotypic diversity among Saccharomyces cerevisiae strains using multi-omics associations Full Text
AUTHORS: Kang Kang; Basti Bergdahl; Daniel Machado; Laura Dato; Ting Li Han; Jun Li; Silas Villas Boas; Markus J Herrgard; Jochen Forster; Gianni Panagiotou;
PUBLISHED: 2019, SOURCE: GIGASCIENCE, VOLUME: 8, ISSUE: 4
AUTHORS: Kang Kang; Basti Bergdahl; Daniel Machado; Laura Dato; Ting Li Han; Jun Li; Silas Villas Boas; Markus J Herrgard; Jochen Forster; Gianni Panagiotou;
PUBLISHED: 2019, SOURCE: GIGASCIENCE, VOLUME: 8, ISSUE: 4
INDEXED IN: Scopus WOS
Scopus WOS10
TITLE: Fast automated reconstruction of genome-scale metabolic models for microbial species and communities
AUTHORS: Daniel Machado; Sergej Andrejev; Melanie Tramontano; Kiran Raosaheb Patil;
PUBLISHED: 2018
AUTHORS: Daniel Machado; Sergej Andrejev; Melanie Tramontano; Kiran Raosaheb Patil;
PUBLISHED: 2018
