Diogo Rodrigo Marques Pratas
AuthID: R-000-XY3
1
TITLE: Reactivation of a Transplant Recipient's Inherited Human Herpesvirus 6 and Implications to the Graft
AUTHORS: Hannolainen, Leo; Pyoria, Lari; Pratas, Diogo; Lohi, Jouko; Skuja, Sandra; Rasa Dzelzkaleja, Santa; Murovska, Modra; Hedman, Klaus; Jahnukainen, Timo; Perdomo, Maria Fernanda;
PUBLISHED: 2024, SOURCE: JOURNAL OF INFECTIOUS DISEASES
AUTHORS: Hannolainen, Leo; Pyoria, Lari; Pratas, Diogo; Lohi, Jouko; Skuja, Sandra; Rasa Dzelzkaleja, Santa; Murovska, Modra; Hedman, Klaus; Jahnukainen, Timo; Perdomo, Maria Fernanda;
PUBLISHED: 2024, SOURCE: JOURNAL OF INFECTIOUS DISEASES
2
TITLE: Intra-host genomic diversity and integration landscape of human tissue-resident DNA virome Full Text
AUTHORS: Pyoria, Lari; Pratas, Diogo; Toppinen, Mari; Simmonds, Peter; Hedman, Klaus; Sajantila, Antti; Perdomo, Maria F.;
PUBLISHED: 2024, SOURCE: NUCLEIC ACIDS RESEARCH, VOLUME: 52, ISSUE: 21
AUTHORS: Pyoria, Lari; Pratas, Diogo; Toppinen, Mari; Simmonds, Peter; Hedman, Klaus; Sajantila, Antti; Perdomo, Maria F.;
PUBLISHED: 2024, SOURCE: NUCLEIC ACIDS RESEARCH, VOLUME: 52, ISSUE: 21
3
TITLE: A sensitive compression-based method for filtering targeted FASTQ sequencing reads
AUTHORS: Sousa, Maria J. P.; Pinho, Armando J.; Pratas, Diogo;
PUBLISHED: 2024, SOURCE: 32nd European Signal Processing Conference (EUSIPCO) in 32ND EUROPEAN SIGNAL PROCESSING CONFERENCE, EUSIPCO 2024
AUTHORS: Sousa, Maria J. P.; Pinho, Armando J.; Pratas, Diogo;
PUBLISHED: 2024, SOURCE: 32nd European Signal Processing Conference (EUSIPCO) in 32ND EUROPEAN SIGNAL PROCESSING CONFERENCE, EUSIPCO 2024
INDEXED IN: 
Scopus 
WOS 
DBLP
Scopus WOS DBLP4
TITLE: Improving the generation of viral consensus sequences using adaptive models
AUTHORS: Sousa, Maria J. P.; Pinho, Armando J.; Pratas, Diogo;
PUBLISHED: 2024, SOURCE: 32nd European Signal Processing Conference (EUSIPCO) in 32ND EUROPEAN SIGNAL PROCESSING CONFERENCE, EUSIPCO 2024
AUTHORS: Sousa, Maria J. P.; Pinho, Armando J.; Pratas, Diogo;
PUBLISHED: 2024, SOURCE: 32nd European Signal Processing Conference (EUSIPCO) in 32ND EUROPEAN SIGNAL PROCESSING CONFERENCE, EUSIPCO 2024
INDEXED IN: Scopus WOS DBLP
Scopus WOS DBLP5
TITLE: Machine Learning-Driven Discovery and Database of Cyanobacteria Bioactive Compounds: A Resource for Therapeutics and Bioremediation Full Text
AUTHORS: Soares, Renato; Azevedo, Luisa; Vasconcelos, Vitor; Pratas, Diogo; Sousa, Sergio F.; Carneiro, Joao;
PUBLISHED: 2024, SOURCE: JOURNAL OF CHEMICAL INFORMATION AND MODELING
AUTHORS: Soares, Renato; Azevedo, Luisa; Vasconcelos, Vitor; Pratas, Diogo; Sousa, Sergio F.; Carneiro, Joao;
PUBLISHED: 2024, SOURCE: JOURNAL OF CHEMICAL INFORMATION AND MODELING
6
TITLE: AltaiR: a C toolkit for alignment-free and temporal analysis of multi-FASTA data Full Text
AUTHORS: Silva, Jorge M.; Pinho, Armando J.; Pratas, Diogo;
PUBLISHED: 2024, SOURCE: GIGASCIENCE, VOLUME: 13
AUTHORS: Silva, Jorge M.; Pinho, Armando J.; Pratas, Diogo;
PUBLISHED: 2024, SOURCE: GIGASCIENCE, VOLUME: 13
7
TITLE: JARVIS3: an efficient encoder for genomic data Full Text
AUTHORS: Sousa, Maria J. P.; Pinho, Armando J.; Pratas, Diogo;
PUBLISHED: 2024, SOURCE: BIOINFORMATICS, VOLUME: 40, ISSUE: 12
AUTHORS: Sousa, Maria J. P.; Pinho, Armando J.; Pratas, Diogo;
PUBLISHED: 2024, SOURCE: BIOINFORMATICS, VOLUME: 40, ISSUE: 12
8
TITLE: Herpesviruses, polyomaviruses, parvoviruses, papillomaviruses, and anelloviruses in vestibular schwannoma
AUTHORS: Jauhiainen, Maria K.; Mohanraj, Ushanandini; Lehecka, Martin; Niemela, Mika; Hirvonen, Timo P.; Pratas, Diogo; Perdomo, Maria F.; Soderlund Venermo, Maria; Makitie, Antti A.; Sinkkonen, Saku T.;
PUBLISHED: 2023, SOURCE: JOURNAL OF NEUROVIROLOGY, VOLUME: 29, ISSUE: 2
AUTHORS: Jauhiainen, Maria K.; Mohanraj, Ushanandini; Lehecka, Martin; Niemela, Mika; Hirvonen, Timo P.; Pratas, Diogo; Perdomo, Maria F.; Soderlund Venermo, Maria; Makitie, Antti A.; Sinkkonen, Saku T.;
PUBLISHED: 2023, SOURCE: JOURNAL OF NEUROVIROLOGY, VOLUME: 29, ISSUE: 2
9
TITLE: TargIDe: a machine -learning workflow for target identification of molecules with antibiofilm activity against<i> Pseudomonas</i> aeruginosa Full Text
AUTHORS: Carneiro, Joao; Magalhaes, Rita P.; Roque, Victor de la Oliva M.; Simoes, Manuel; Pratas, Diogo; Sérgio F. Sousa ;
PUBLISHED: 2023, SOURCE: JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, VOLUME: 37, ISSUE: 5-6
AUTHORS: Carneiro, Joao; Magalhaes, Rita P.; Roque, Victor de la Oliva M.; Simoes, Manuel; Pratas, Diogo; Sérgio F. Sousa ;
PUBLISHED: 2023, SOURCE: JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, VOLUME: 37, ISSUE: 5-6
10
TITLE: Mapping human pathogens in wastewater using a metatranscriptomic approach Full Text
AUTHORS: Carneiro, Joao; Pascoal, Francisco; Semedo, Miguel; Pratas, Diogo; Tomasino, Maria Paola; Rego, Adriana; Carvalho, Maria de Fatima; Mucha, Ana Paula ; Magalhaes, Catarina ;
PUBLISHED: 2023, SOURCE: ENVIRONMENTAL RESEARCH, VOLUME: 231
AUTHORS: Carneiro, Joao; Pascoal, Francisco; Semedo, Miguel; Pratas, Diogo; Tomasino, Maria Paola; Rego, Adriana; Carvalho, Maria de Fatima; Mucha, Ana Paula ; Magalhaes, Catarina ;
PUBLISHED: 2023, SOURCE: ENVIRONMENTAL RESEARCH, VOLUME: 231
