Diogo Rodrigo Marques Pratas
AuthID: R-000-XY3
11
TITLE: JARVIS2: A data compressor for large genome sequences
AUTHORS: Diogo Pratas; Armando Pinho;
PUBLISHED: 2023, SOURCE: 2023 Data Compression Conference, DCC 2023 in Data Compression Conference Proceedings, VOLUME: 2023-March
AUTHORS: Diogo Pratas; Armando Pinho;
PUBLISHED: 2023, SOURCE: 2023 Data Compression Conference, DCC 2023 in Data Compression Conference Proceedings, VOLUME: 2023-March
INDEXED IN: 
Scopus
Scopus IN MY: 
ORCID
ORCID12
TITLE: Exploring Kolmogorov Complexity Approximations for Data Analysis: Insights and Applications
AUTHORS: Jorge Miguel Silva; Diogo Pratas; Sérgio Matos;
PUBLISHED: 2023, SOURCE: 14th IFIP WG 5.5/SOCOLNET Advanced Doctoral Conference on Computing, Electrical and Industrial Systems, DoCEIS 2023 in IFIP Advances in Information and Communication Technology, VOLUME: 678
AUTHORS: Jorge Miguel Silva; Diogo Pratas; Sérgio Matos;
PUBLISHED: 2023, SOURCE: 14th IFIP WG 5.5/SOCOLNET Advanced Doctoral Conference on Computing, Electrical and Industrial Systems, DoCEIS 2023 in IFIP Advances in Information and Communication Technology, VOLUME: 678
13
TITLE: AlcoR: alignment-free simulation, mapping, and visualization of low-complexity regions in biological data Full Text
AUTHORS: Silva, Jorge M.; Qi, Weihong; Pinho, Armando J.; Pratas, Diogo;
PUBLISHED: 2023, SOURCE: GIGASCIENCE, VOLUME: 12
AUTHORS: Silva, Jorge M.; Qi, Weihong; Pinho, Armando J.; Pratas, Diogo;
PUBLISHED: 2023, SOURCE: GIGASCIENCE, VOLUME: 12
14
TITLE: Unmasking the tissue-resident eukaryotic DNA virome in humans
AUTHORS: Lari Pyöriä; Diogo Pratas; Mari Toppinen; Klaus Hedman; Antti Sajantila; Maria F Perdomo;
PUBLISHED: 2023, SOURCE: Nucleic Acids Research, VOLUME: 51, ISSUE: 7
AUTHORS: Lari Pyöriä; Diogo Pratas; Mari Toppinen; Klaus Hedman; Antti Sajantila; Maria F Perdomo;
PUBLISHED: 2023, SOURCE: Nucleic Acids Research, VOLUME: 51, ISSUE: 7
15
TITLE: JARVIS2: a data compressor for large genome sequences
AUTHORS: Diogo Pratas; Armando J Pinho;
PUBLISHED: 2023, SOURCE: 2023 Data Compression Conference (DCC)
AUTHORS: Diogo Pratas; Armando J Pinho;
PUBLISHED: 2023, SOURCE: 2023 Data Compression Conference (DCC)
16
TITLE: Detection of Low-Copy Human Virus DNA upon Prolonged Formalin Fixation
AUTHORS: Mielonen, OI; Pratas, D; Hedman, K; Sajantila, A; Perdomo, MF;
PUBLISHED: 2022, SOURCE: VIRUSES-BASEL, VOLUME: 14, ISSUE: 1
AUTHORS: Mielonen, OI; Pratas, D; Hedman, K; Sajantila, A; Perdomo, MF;
PUBLISHED: 2022, SOURCE: VIRUSES-BASEL, VOLUME: 14, ISSUE: 1
17
TITLE: The complexity landscape of viral genomes
AUTHORS: Silva, Jorge Miguel; Pratas, Diogo; Caetano, Tania; Matos, Sergio;
PUBLISHED: 2022, SOURCE: GIGASCIENCE, VOLUME: 11
AUTHORS: Silva, Jorge Miguel; Pratas, Diogo; Caetano, Tania; Matos, Sergio;
PUBLISHED: 2022, SOURCE: GIGASCIENCE, VOLUME: 11
18
TITLE: Feature-Based Classification of Archaeal Sequences Using Compression-Based Methods
AUTHORS: Silva, Jorge Miguel; Pratas, Diogo; Caetano, Tania; Matos, Sergio;
PUBLISHED: 2022, SOURCE: 10th Iberian Conference on Pattern Recognition and Image Analysis (IbPRIA) in PATTERN RECOGNITION AND IMAGE ANALYSIS (IBPRIA 2022), VOLUME: 13256
AUTHORS: Silva, Jorge Miguel; Pratas, Diogo; Caetano, Tania; Matos, Sergio;
PUBLISHED: 2022, SOURCE: 10th Iberian Conference on Pattern Recognition and Image Analysis (IbPRIA) in PATTERN RECOGNITION AND IMAGE ANALYSIS (IBPRIA 2022), VOLUME: 13256
19
TITLE: AlcoR: alignment-free simulation, mapping, and visualization of low-complexity regions in biological data Full Text
AUTHORS: Jorge M Silva; Weihong Qi; Armando J Pinho; Diogo Pratas;
PUBLISHED: 2022, SOURCE: GigaScience, VOLUME: 12
AUTHORS: Jorge M Silva; Weihong Qi; Armando J Pinho; Diogo Pratas;
PUBLISHED: 2022, SOURCE: GigaScience, VOLUME: 12
20
TITLE: The haplotype-resolved chromosome pairs of a heterozygous diploid African cassava cultivar reveal novel pan-genome and allele-specific transcriptome features
AUTHORS: Weihong Qi; Yi-Wen Lim; Andrea Patrignani; Pascal Schläpfer; Anna Bratus-Neuenschwander; Simon Grüter; Christelle Chanez; Nathalie Rodde; Elisa Prat; Sonia Vautrin; Margaux-Alison Fustier; Diogo Pratas; Ralph Schlapbach; Wilhelm Gruissem;
PUBLISHED: 2022, SOURCE: GigaScience, VOLUME: 11
AUTHORS: Weihong Qi; Yi-Wen Lim; Andrea Patrignani; Pascal Schläpfer; Anna Bratus-Neuenschwander; Simon Grüter; Christelle Chanez; Nathalie Rodde; Elisa Prat; Sonia Vautrin; Margaux-Alison Fustier; Diogo Pratas; Ralph Schlapbach; Wilhelm Gruissem;
PUBLISHED: 2022, SOURCE: GigaScience, VOLUME: 11
