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TITLE: Parallel evolution of fish bi-modal breathing and expansion of olfactory receptor (OR) genes: toward a universal ORs nomenclature  Full Text
AUTHORS: Silva, Liliana; Mendes, Tito; Ramos, Luana; Zhang, Guojie; Antunes, Agostinho ;
PUBLISHED: 2023, SOURCE: JOURNAL OF GENETICS AND GENOMICS, VOLUME: 50, ISSUE: 8
INDEXED IN: Scopus WOS CrossRef: 1
2
TITLE: Evolutionary History, Genomic Adaptation to Toxic Diet, and Extinction of the Carolina Parakeet
AUTHORS: Pere Gelabert; Marcela Sandoval Velasco; Aitor Serres; Marc de Manuel; Pere Renom; Ashot Margaryan; Josefin Stiller; Toni de Dios; Qi Fang; Shaohong H Feng; Santi Manosa; George Pacheco; Manuel Ferrando Bernal; Guolin L Shi; Fei Hao; Xianqing Q Chen; Bent Petersen; Remi Andre Olsen; Arcadi Navarro; Yuan Deng; Love Dalen; Tomas Marques Bonet; Guojie J Zhang; Agostinho Antunes; Thomas T P Gilbert; Carles Lalueza Fox; ...More
PUBLISHED: 2020, SOURCE: CURRENT BIOLOGY, VOLUME: 30, ISSUE: 1
INDEXED IN: Scopus WOS
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TITLE: Avian Binocularity and Adaptation to Nocturnal Environments: Genomic Insights from a Highly Derived Visual Phenotype
AUTHORS: Rui Borges; Joao Fonseca; Cidalia Gomes; Warren E Johnson; Stephen J O'Brien; Guojie J Zhang; Thomas T P Gilbert; Erich D Jarvis; Agostinho Antunes ;
PUBLISHED: 2019, SOURCE: GENOME BIOLOGY AND EVOLUTION, VOLUME: 11, ISSUE: 8
INDEXED IN: Scopus WOS CrossRef: 12
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TITLE: Bone-associated gene evolution and the origin of flight in birds  Full Text
AUTHORS: Joao Paulo Machado; Warren E Johnson; Thomas T P Gilbert; Guojie J Zhang; Erich D Jarvis; Stephen J O'Brien; Agostinho Antunes ;
PUBLISHED: 2016, SOURCE: BMC GENOMICS, VOLUME: 17, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 11
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TITLE: Whole-Genome Identification, Phylogeny, and Evolution of the Cytochrome P450 Family 2 (CYP2) Subfamilies in Birds  Full Text
AUTHORS: Daniela Almeida; Maldonado, E. ; Imran Khan; Liliana Silva; Thomas T P Gilbert; Guojie J Zhang; Erich D Jarvis; Stephen J O'Brien; Warren E Johnson; Agostinho Antunes ;
PUBLISHED: 2016, SOURCE: GENOME BIOLOGY AND EVOLUTION, VOLUME: 8, ISSUE: 4
INDEXED IN: Scopus WOS CrossRef: 21
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TITLE: Gene loss, adaptive evolution and the co-evolution of plumage coloration genes with opsins in birds  Full Text
AUTHORS: Rui Borges; Imran Khan; Warren E Johnson; Thomas T P Gilbert; Guojie J Zhang; Erich D Jarvis; Stephen J O'Brien; Agostinho Antunes ;
PUBLISHED: 2015, SOURCE: BMC GENOMICS, VOLUME: 16, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 50
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TITLE: Olfactory Receptor Subgenomes Linked with Broad Ecological Adaptations in Sauropsida
AUTHORS: Imran Khan; Zhikai K Yang; Maldonado, E. ; Cai Li; Guojie J Zhang; Thomas T P Gilbert; Erich D Jarvis; Stephen J O'Brien; Warren E Johnson; Agostinho Antunes ;
PUBLISHED: 2015, SOURCE: MOLECULAR BIOLOGY AND EVOLUTION, VOLUME: 32, ISSUE: 11
INDEXED IN: Scopus WOS CrossRef: 73
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TITLE: Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species  Full Text
AUTHORS: Keith R Bradnam; Joseph N Fass; Anton Alexandrov; Paul Baranay; Michael Bechner; Inanc Birol; Sebastien Boisvert; Jarrod A Chapman; Guillaume Chapuis; Rayan Chikhi; Hamidreza Chitsaz; Wen Chi Chou; Jacques Corbeil; Cristian Del Fabbro; Roderick R Docking; Richard Durbin; Dent Earl; Scott Emrich; Pavel Fedotov; Nuno A Fonseca ; Ganeshkumar Ganapathy; Richard A Gibbs; Sante Gnerre; Elenie Godzaridis; Steve Goldstein; Matthias Haimel; Giles Hall; David Haussler; Joseph B Hiatt; Isaac Y Ho; Jason Howard; Martin Hunt; Shaun D Jackman; David B Jaffe; Erich D Jarvis; Huaiyang Jiang; Sergey Kazakov; Paul J Kersey; Jacob O Kitzman; James R Knight; Sergey Koren; Tak Wah Lam; Dominique Lavenier; Francois Laviolette; Yingrui R Li; Zhenyu Y Li; Binghang H Liu; Yue Liu; Ruibang Luo; Iain MacCallum; Matthew D MacManes; Nicolas Maillet; Sergey Melnikov; Delphine Naquin; Zemin Ning; Thomas D Otto; Benedict Paten; Octavio S Paulo; Adam M Phillippy; Francisco Pina Martins; Michael Place; Dariusz Przybylski; Xiang Qin; Carson Qu; Filipe J Ribeiro; Stephen Richards; Daniel S Rokhsar; Graham G Ruby; Simone Scalabrin; Michael C Schatz; David C Schwartz; Alexey Sergushichev; Ted Sharpe; Timothy I Shaw; Jay Shendure; Yujian J Shi; Jared T Simpson; Henry Song; Fedor Tsarev; Francesco Vezzi; Riccardo Vicedomini; Bruno M Vieira; Jun Wang; Kim C Worley; Shuangye Y Yin; Siu Ming Yiu; Jianying Y Yuan; Guojie J Zhang; Hao Zhang; Shiguo Zhou; Ian F Korf; ...More
PUBLISHED: 2013, SOURCE: GIGASCIENCE, VOLUME: 2, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 518
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