José Luís Silva Borges Costa
AuthID: R-000-8F5
31
TITLE: Targeted Gene Next-Generation Sequencing Panel in Patients with Advanced Lung Adenocarcinoma: Paving the Way for Clinical Implementation Full Text
AUTHORS: Fernandes, MG; Jacob, M; Martins, N ; Moura, CS; Guimaraes, S; Reis, JP; Justino, A; Pina, MJ; Cirnes, L ; Sousa, C; Pinto, J; Marques, JA; Machado, JC ; Hespanhol, V ; Costa, JL;
PUBLISHED: 2019, SOURCE: CANCERS, VOLUME: 11, ISSUE: 9
AUTHORS: Fernandes, MG; Jacob, M; Martins, N ; Moura, CS; Guimaraes, S; Reis, JP; Justino, A; Pina, MJ; Cirnes, L ; Sousa, C; Pinto, J; Marques, JA; Machado, JC ; Hespanhol, V ; Costa, JL;
PUBLISHED: 2019, SOURCE: CANCERS, VOLUME: 11, ISSUE: 9
32
TITLE: Gastric microbial community profiling reveals a dysbiotic cancer-associated microbiota
AUTHORS: Rui M Ferreira; Joana Pereira Marques; Ines Pinto Ribeiro; Jose L Costa; Fatima Carneiro ; Jose C Machado ; Ceu Figueiredo ;
PUBLISHED: 2018, SOURCE: GUT, VOLUME: 67, ISSUE: 2
AUTHORS: Rui M Ferreira; Joana Pereira Marques; Ines Pinto Ribeiro; Jose L Costa; Fatima Carneiro ; Jose C Machado ; Ceu Figueiredo ;
PUBLISHED: 2018, SOURCE: GUT, VOLUME: 67, ISSUE: 2
33
TITLE: Determining tumor mutation load using an NGS-based, target gene panel Full Text
AUTHORS: Machado, JC ; Reis, J; Fernandes, M; Silva, R; Cirnes, L; Chaudhary, R; Carneiro, F ; Costa, JL;
PUBLISHED: 2018, SOURCE: 5th Immunotherapy of Cancer Conference (ITOC) in EUROPEAN JOURNAL OF CANCER, VOLUME: 92
AUTHORS: Machado, JC ; Reis, J; Fernandes, M; Silva, R; Cirnes, L; Chaudhary, R; Carneiro, F ; Costa, JL;
PUBLISHED: 2018, SOURCE: 5th Immunotherapy of Cancer Conference (ITOC) in EUROPEAN JOURNAL OF CANCER, VOLUME: 92
INDEXED IN: 
WOS
WOS34
TITLE: Tumor-specific neoantigens drive T-cell clonotype convergence Full Text
AUTHORS: Machado, JC ; Reis, J; Fernandes, M; Silva, R; Cirnes, L; Carneiro, F ; Costa, JL;
PUBLISHED: 2018, SOURCE: 5th Immunotherapy of Cancer Conference (ITOC) in EUROPEAN JOURNAL OF CANCER, VOLUME: 92
AUTHORS: Machado, JC ; Reis, J; Fernandes, M; Silva, R; Cirnes, L; Carneiro, F ; Costa, JL;
PUBLISHED: 2018, SOURCE: 5th Immunotherapy of Cancer Conference (ITOC) in EUROPEAN JOURNAL OF CANCER, VOLUME: 92
INDEXED IN: WOS
WOS35
TITLE: Antibacterial effect and biocompatibility of a novel nanostructured ZnO-coated gutta-percha cone for improved endodontic treatment Full Text
AUTHORS: Alves, MJ; Grenho, L ; Lopes, C; Borges, J; Vaz, F; Vaz, IP ; Fernandes, MH;
PUBLISHED: 2018, SOURCE: MATERIALS SCIENCE & ENGINEERING C-MATERIALS FOR BIOLOGICAL APPLICATIONS, VOLUME: 92
AUTHORS: Alves, MJ; Grenho, L ; Lopes, C; Borges, J; Vaz, F; Vaz, IP ; Fernandes, MH;
PUBLISHED: 2018, SOURCE: MATERIALS SCIENCE & ENGINEERING C-MATERIALS FOR BIOLOGICAL APPLICATIONS, VOLUME: 92
36
TITLE: Multicenter Evaluation of the Idylla NRAS-BRAF Mutation Test in Metastatic Colorectal Cancer
AUTHORS: Ivan Prieto Potin; Clara Montagut; Beatriz Bellosillo; Matthew Evans; Matthew Smith; Linea Melchior; Werner Reiltin; Michael Bennett; Veronica Pennati; Francesca Castiglione; Karl Friedrich Buerrig; Ulrike Cooper; Barbara Dockhorn Dworniczak; Christiana Rossenbach; Claudia M Luna Aguirre; Hugo A Barrera Saldana; Jose C Machado ; Jose L Costa; Rinat Yacobi; Hilla Tabibian Keissar; ...More
PUBLISHED: 2018, SOURCE: JOURNAL OF MOLECULAR DIAGNOSTICS, VOLUME: 20, ISSUE: 5
AUTHORS: Ivan Prieto Potin; Clara Montagut; Beatriz Bellosillo; Matthew Evans; Matthew Smith; Linea Melchior; Werner Reiltin; Michael Bennett; Veronica Pennati; Francesca Castiglione; Karl Friedrich Buerrig; Ulrike Cooper; Barbara Dockhorn Dworniczak; Christiana Rossenbach; Claudia M Luna Aguirre; Hugo A Barrera Saldana; Jose C Machado ; Jose L Costa; Rinat Yacobi; Hilla Tabibian Keissar; ...More
PUBLISHED: 2018, SOURCE: JOURNAL OF MOLECULAR DIAGNOSTICS, VOLUME: 20, ISSUE: 5
37
TITLE: Simultaneous detection of lung fusions using a multiplex RT-PCR next generation sequencing-based approach: a multi-institutional research study Full Text
AUTHORS: Cecily P Vaughn; Jose Luis Costa; Harriet E Feilotter; Rosella Petraroli; Varun Bagai; Anna Maria Rachiglio; Federica Zito Marino; Bastiaan Tops; Henriette M Kurth; Kazuko Sakai; Andrea Mafficini; Roy R L Bastien; Anne Reiman; Delphine Le Corre; Alexander Boag; Susan Crocker; Michel Bihl; Astrid Hirschmann; Aldo Scarpa; Jose Carlos Machado ; ...More
PUBLISHED: 2018, SOURCE: BMC CANCER, VOLUME: 18, ISSUE: 1
AUTHORS: Cecily P Vaughn; Jose Luis Costa; Harriet E Feilotter; Rosella Petraroli; Varun Bagai; Anna Maria Rachiglio; Federica Zito Marino; Bastiaan Tops; Henriette M Kurth; Kazuko Sakai; Andrea Mafficini; Roy R L Bastien; Anne Reiman; Delphine Le Corre; Alexander Boag; Susan Crocker; Michel Bihl; Astrid Hirschmann; Aldo Scarpa; Jose Carlos Machado ; ...More
PUBLISHED: 2018, SOURCE: BMC CANCER, VOLUME: 18, ISSUE: 1
38
TITLE: Assessing tumor mutation load using an NGS-based, routine-friendly target gene panel
AUTHORS: Jose Costa; Joana Reis; Margarida Fernandes; Rafaela Silva; Luis Cirnes; Ruchi Chaudhary; Fatima Carneiro; Jose C Machado;
PUBLISHED: 2018, SOURCE: Annual Meeting of the American-Association-for-Cancer-Research (AACR) in CANCER RESEARCH, VOLUME: 78, ISSUE: 13
AUTHORS: Jose Costa; Joana Reis; Margarida Fernandes; Rafaela Silva; Luis Cirnes; Ruchi Chaudhary; Fatima Carneiro; Jose C Machado;
PUBLISHED: 2018, SOURCE: Annual Meeting of the American-Association-for-Cancer-Research (AACR) in CANCER RESEARCH, VOLUME: 78, ISSUE: 13
INDEXED IN: WOS
WOS39
TITLE: T-cell clonotype convergence in colorectal cancer driven by tumor-specific neoantigens
AUTHORS: Jose C Machado ; Joana Reis; Margarida Fernandes; Rafaela Silva; Luis Cirnes; Fatima Carneiro ; Jose L Costa;
PUBLISHED: 2018, SOURCE: Annual Meeting of the American-Association-for-Cancer-Research (AACR) in CANCER RESEARCH, VOLUME: 78, ISSUE: 13
AUTHORS: Jose C Machado ; Joana Reis; Margarida Fernandes; Rafaela Silva; Luis Cirnes; Fatima Carneiro ; Jose L Costa;
PUBLISHED: 2018, SOURCE: Annual Meeting of the American-Association-for-Cancer-Research (AACR) in CANCER RESEARCH, VOLUME: 78, ISSUE: 13
INDEXED IN: WOS 
CrossRef
WOS CrossRef40
TITLE: Integration of next-generation sequencing in clinical diagnostic molecular pathology laboratories for analysis of solid tumours; an expert opinion on behalf of IQN Path ASBL Full Text
AUTHORS: Deans, ZC; Costa, JL; Cree, I; Dequeker, E; Edsjö, A; Henderson, S; Hummel, M; Ligtenberg, MJ; Loddo, M; Machado, JC ; Marchetti, A; Marquis, K; Mason, J; Normanno, N; Rouleau, E; Schuuring, E; Snelson, KM; Thunnissen, E; Tops, B; Williams, G; ...More
PUBLISHED: 2017, SOURCE: VIRCHOWS ARCHIV, VOLUME: 470, ISSUE: 1
AUTHORS: Deans, ZC; Costa, JL; Cree, I; Dequeker, E; Edsjö, A; Henderson, S; Hummel, M; Ligtenberg, MJ; Loddo, M; Machado, JC ; Marchetti, A; Marquis, K; Mason, J; Normanno, N; Rouleau, E; Schuuring, E; Snelson, KM; Thunnissen, E; Tops, B; Williams, G; ...More
PUBLISHED: 2017, SOURCE: VIRCHOWS ARCHIV, VOLUME: 470, ISSUE: 1
