André Maria Sande Ribeiro de Serpa Oliva
AuthID: R-002-RP4
11
TITLE: Automatic Classification of Z-ring Formation Stages at the Single Cell Level in Escherichia Coli by Machine Learning
AUTHORS: Marzieh Zare; Ramakanth Neeli Venkata; Leonardo Martins; Sari Peltonen; Ulla Ruotsalainen; Andre S Ribeiro;
PUBLISHED: 2017, SOURCE: 10th International Joint Conference on Biomedical Engineering Systems and Technologies in PROCEEDINGS OF THE 10TH INTERNATIONAL JOINT CONFERENCE ON BIOMEDICAL ENGINEERING SYSTEMS AND TECHNOLOGIES, VOL 2: BIOIMAGING
AUTHORS: Marzieh Zare; Ramakanth Neeli Venkata; Leonardo Martins; Sari Peltonen; Ulla Ruotsalainen; Andre S Ribeiro;
PUBLISHED: 2017, SOURCE: 10th International Joint Conference on Biomedical Engineering Systems and Technologies in PROCEEDINGS OF THE 10TH INTERNATIONAL JOINT CONFERENCE ON BIOMEDICAL ENGINEERING SYSTEMS AND TECHNOLOGIES, VOL 2: BIOIMAGING
INDEXED IN: 
WOS
WOS12
TITLE: Increased cytoplasm viscosity hampers aggregate polar segregation in Escherichia coli. Cytoplasm viscosity hampers aggregate segregation Full Text
AUTHORS: Samuel M D Oliveira; Ramakanth Neeli Venkata; Nadia S M Goncalves; Joao A Santinha; Leonardo Martins; Tran, H; Jarno Makela; Abhishekh Gupta; Marilia Barandas; Antti Hakkinen; Jason Lloyd Price; Jose M Fonseca; Andre S Ribeiro;
PUBLISHED: 2016, SOURCE: MOLECULAR MICROBIOLOGY, VOLUME: 99, ISSUE: 4
AUTHORS: Samuel M D Oliveira; Ramakanth Neeli Venkata; Nadia S M Goncalves; Joao A Santinha; Leonardo Martins; Tran, H; Jarno Makela; Abhishekh Gupta; Marilia Barandas; Antti Hakkinen; Jason Lloyd Price; Jose M Fonseca; Andre S Ribeiro;
PUBLISHED: 2016, SOURCE: MOLECULAR MICROBIOLOGY, VOLUME: 99, ISSUE: 4
13
TITLE: Robustness of the Process of Nucleoid Exclusion of Protein Aggregates in Escherichia coli
AUTHORS: Ramakanth Neeli Venkata; Antti Martikainen; Abhishekh Gupta; Nadia Goncalves; Jose Fonseca; Andre S Ribeiro;
PUBLISHED: 2016, SOURCE: JOURNAL OF BACTERIOLOGY, VOLUME: 198, ISSUE: 6
AUTHORS: Ramakanth Neeli Venkata; Antti Martikainen; Abhishekh Gupta; Nadia Goncalves; Jose Fonseca; Andre S Ribeiro;
PUBLISHED: 2016, SOURCE: JOURNAL OF BACTERIOLOGY, VOLUME: 198, ISSUE: 6
INDEXED IN: 
Scopus WOS
Scopus WOS14
TITLE: 'miSimBa' - A Simulator of Synthetic Time-Lapsed Microscopy Images of Bacterial Cells
AUTHORS: Leonardo Martins; Jose Fonseca; Andre Ribeiro;
PUBLISHED: 2015, SOURCE: IEEE 4th Portuguese meeting on bioengineering (enbeg) in 2015 IEEE 4TH PORTUGUESE MEETING ON BIOENGINEERING (ENBENG)
AUTHORS: Leonardo Martins; Jose Fonseca; Andre Ribeiro;
PUBLISHED: 2015, SOURCE: IEEE 4th Portuguese meeting on bioengineering (enbeg) in 2015 IEEE 4TH PORTUGUESE MEETING ON BIOENGINEERING (ENBENG)
INDEXED IN: WOS
WOS15
TITLE: Dynamics of transcription of closely spaced promoters in Escherichia coli, one event at a time Full Text
AUTHORS: Leonardo Martins; Jarno Makela; Antti Hakkinen; Meenakshisundaram Kandhavelu; Olli Yli Harja; Jose M Fonseca ; Andre S Ribeiro;
PUBLISHED: 2012, SOURCE: JOURNAL OF THEORETICAL BIOLOGY, VOLUME: 301
AUTHORS: Leonardo Martins; Jarno Makela; Antti Hakkinen; Meenakshisundaram Kandhavelu; Olli Yli Harja; Jose M Fonseca ; Andre S Ribeiro;
PUBLISHED: 2012, SOURCE: JOURNAL OF THEORETICAL BIOLOGY, VOLUME: 301
16
TITLE: Dynamical effects of transcriptional pause-prone sites Full Text
AUTHORS: Andre S Ribeiro; Antti Hakkinen; Shannon Healy; Olli Yli Harja;
PUBLISHED: 2010, SOURCE: COMPUTATIONAL BIOLOGY AND CHEMISTRY, VOLUME: 34, ISSUE: 3
AUTHORS: Andre S Ribeiro; Antti Hakkinen; Shannon Healy; Olli Yli Harja;
PUBLISHED: 2010, SOURCE: COMPUTATIONAL BIOLOGY AND CHEMISTRY, VOLUME: 34, ISSUE: 3
17
TITLE: Dynamic Agent-Based Model of Hand-Preference Behavior Patterns in the Mouse
AUTHORS: Andre S Ribeiro; Jason Lloyd Price; Brenda A Eales; Fred G Biddle;
PUBLISHED: 2010, SOURCE: ADAPTIVE BEHAVIOR, VOLUME: 18, ISSUE: 2
AUTHORS: Andre S Ribeiro; Jason Lloyd Price; Brenda A Eales; Fred G Biddle;
PUBLISHED: 2010, SOURCE: ADAPTIVE BEHAVIOR, VOLUME: 18, ISSUE: 2
18
TITLE: Stochastic and delayed stochastic models of gene expression and regulation Full Text
AUTHORS: Andre S Ribeiro;
PUBLISHED: 2010, SOURCE: MATHEMATICAL BIOSCIENCES, VOLUME: 223, ISSUE: 1
AUTHORS: Andre S Ribeiro;
PUBLISHED: 2010, SOURCE: MATHEMATICAL BIOSCIENCES, VOLUME: 223, ISSUE: 1
19
TITLE: Tuning cell differentiation patterns and single cell dynamics by regulating proteins' functionalities in a toggle switch Full Text
AUTHORS: Xiaofeng Dai; Shannon Healy; Olli Yli Harja; Andre S Ribeiro;
PUBLISHED: 2009, SOURCE: JOURNAL OF THEORETICAL BIOLOGY, VOLUME: 261, ISSUE: 3
AUTHORS: Xiaofeng Dai; Shannon Healy; Olli Yli Harja; Andre S Ribeiro;
PUBLISHED: 2009, SOURCE: JOURNAL OF THEORETICAL BIOLOGY, VOLUME: 261, ISSUE: 3
20
TITLE: Variability of the distribution of differentiation pathway choices regulated by a multipotent delayed stochastic switch Full Text
AUTHORS: Andre S Ribeiro; Xiaofeng F Dai; Olli Yli Harja;
PUBLISHED: 2009, SOURCE: JOURNAL OF THEORETICAL BIOLOGY, VOLUME: 260, ISSUE: 1
AUTHORS: Andre S Ribeiro; Xiaofeng F Dai; Olli Yli Harja;
PUBLISHED: 2009, SOURCE: JOURNAL OF THEORETICAL BIOLOGY, VOLUME: 260, ISSUE: 1
