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TITLE: Guidelines for reproducible analysis of adaptive immune receptor repertoire sequencing data  Full Text
AUTHORS: Peres, Ayelet; Klein, Vered; Frankel, Boaz; Lees, William; Polak, Pazit; Meehan, Mark; Rocha, Artur ; Correia Lopes, Joao ; Yaari, Gur;
PUBLISHED: 2024, SOURCE: BRIEFINGS IN BIOINFORMATICS, VOLUME: 25, ISSUE: 3
INDEXED IN: Scopus WOS CrossRef Unpaywall
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TITLE: Using Digital Tools to Study the Health of Adults Born Preterm at a Large Scale: e-Cohort Pilot Study  Full Text
AUTHORS: Lorthe, Elsa; Santos, Carolina; Ornelas, Jose Pedro; Doetsch, Julia Nadine ; Marques, Sandra C. S.; Teixeira, Raquel ; Santos, Ana Cristina; Rodrigues, Carina; Goncalves, Goncalo ; Sousa, Pedro Ferreira; Lopes, Joao Correia ; Rocha, Artur ; Barros, Henrique ;
PUBLISHED: 2023, SOURCE: JOURNAL OF MEDICAL INTERNET RESEARCH, VOLUME: 25
INDEXED IN: Scopus WOS CrossRef Unpaywall
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TITLE: Development of a data classification system for preterm birth cohort studies: the RECAP Preterm project  Full Text
AUTHORS: Bamber, D; Collins, HE; Powell, C; Goncalves, GC ; Johnson, S; Manktelow, B; Ornelas, JP; Lopes, JC ; Rocha, A ; Draper, ES;
PUBLISHED: 2022, SOURCE: BMC MEDICAL RESEARCH METHODOLOGY, VOLUME: 22, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef
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TITLE: Feasibility of Digital Cognitive Behavioral Therapy for Depressed Older Adults With the Moodbuster Platform: Protocol for 2 Pilot Feasibility Studies
AUTHORS: Amarti, K; Schulte, MHJ; Kleiboer, A; Van Genugten, CR; Oudega, M; Sonnenberg, C; Gonçalves, Gc ; Rocha, A ; Riper, H;
PUBLISHED: 2022, SOURCE: JMIR Research Protocols, VOLUME: 11, ISSUE: 10
INDEXED IN: Scopus CrossRef Unpaywall
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TITLE: Life course of retrospective harmonization initiatives: key elements to consider
AUTHORS: Fortier, Isabel; Wey, Tina W.; Bergeron, Julie; Pinot de Moira, Angela; Nybo Andersen, Anne Marie; Bishop, Tom; Murtagh, Madeleine J.; Miocevic, Milica; Swertz, Morris A.; van Enckevort, Esther; Marcon, Yannick; Mayrhofer, Michaela. Th.; Ornelas, Jos Pedro; Sebert, Sylvain; Santos, Ana Cristina; Rocha, Artur ; Wilson, Rebecca C.; Griffith, Lauren E.; Burton, Paul;
PUBLISHED: 2022, SOURCE: JOURNAL OF DEVELOPMENTAL ORIGINS OF HEALTH AND DISEASE, VOLUME: 14, ISSUE: 2
INDEXED IN: Scopus WOS CrossRef Unpaywall
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TITLE: Handling Privacy Preservation in a Software Ecosystem for the Querying and Processing of Deep Sequencing Data
AUTHORS: Rocha, A ; Costa, A; Oliveira, MA ; Aguiar, A ;
PUBLISHED: 2021, SOURCE: ERCIM NEWS, VOLUME: 2021, ISSUE: 126
INDEXED IN: WOS DBLP
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TITLE: The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoires
AUTHORS: Pavlovic, M; Scheffer, L; Motwani, K; Kanduri, C; Kompova, R; Vazov, N; Waagan, K; Bernal, FLM; Costa, AA; Corrie, B; Akbar, R; Al Hajj, GS; Balaban, G; Brusko, TM; Chernigovskaya, M; Christley, S; Cowell, LG; Frank, R; Grytten, I; Gundersen, S; Haff, IH; Hovig, E; Hsieh, PH; Klambauer, G; Kuijjer, ML; Lund Andersen, C; Martini, A; Minotto, T; Pensar, J; Rand, K; Riccardi, E; Robert, PA; Rocha, A ; Slabodkin, A; Snapkov, I; Sollid, LM; Titov, D; Weber, CR; Widrich, M; Yaari, G; Greiff, V; Sandve, GK; ...More
PUBLISHED: 2021, SOURCE: NATURE MACHINE INTELLIGENCE, VOLUME: 3, ISSUE: 11
INDEXED IN: Scopus WOS DBLP CrossRef
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TITLE: Evaluation of a temporal causal model for predicting the mood of clients in an online therapy
AUTHORS: Dennis Becker; Vincent Bremer; Burkhardt Funk; Mark Hoogendoorn; Artur Rocha ; Heleen Riper;
PUBLISHED: 2020, SOURCE: EVIDENCE-BASED MENTAL HEALTH, VOLUME: 23, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 1
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