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Ana Teresa Correia de Freitas
AuthID:
R-000-1HN
Publications
Confirmed
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Document Source:
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Document Type:
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Article (27)
Proceedings Paper (13)
Abstract (2)
Editorial Material (1)
Review (1)
Book Chapter (1)
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Year Asc
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Confirmed Publications: 45
31
TITLE:
Improved model checking techniques for state space analysis of gene regulatory networks
AUTHORS:
Pais, HC; McMillan, KL; Sentovich, EM;
Freitas, AT
;
Oliveira, AL
;
PUBLISHED:
2009
,
SOURCE:
Handbook of Research on Computational Methodologies in Gene Regulatory Networks
INDEXED IN:
Scopus
CrossRef
IN MY:
ORCID
32
TITLE:
An analysis of the positional distribution of DNA motifs in promoter regions and its biological relevance
AUTHORS:
Casimiro, AC;
Vinga, S
;
Freitas, AT
;
Oliveira, AL
;
PUBLISHED:
2008
,
SOURCE:
BMC BIOINFORMATICS,
VOLUME:
9,
ISSUE:
1
INDEXED IN:
Scopus
WOS
DBLP
CrossRef
Handle
IN MY:
ORCID
33
TITLE:
Identification of transcription factor binding sites in promoter regions by modularity analysis of the motif co-occurrence graph
Full Text
AUTHORS:
Alexandre P Francisco
;
Arlindo L Oliveira
;
Ana T Reitas
;
PUBLISHED:
2008
,
SOURCE:
4th International Symposium on Bioinformatics Research and Applications
in
BIOINFORMATICS RESEARCH AND APPLICATIONS,
VOLUME:
4983
INDEXED IN:
Scopus
WOS
DBLP
CrossRef
IN MY:
ORCID
34
TITLE:
Temporal logic patterns for querying dynamic models of cellular interaction networks
Full Text
AUTHORS:
Pedro T Monteiro
;
Delphine Ropers
; Radu Mateescu;
Ana T Freitas
; Hidde de Jong;
PUBLISHED:
2008
,
SOURCE:
Joint Meeting of the 7th European Conference on Computational Biology/5th Meeting of the Bioinformatics-Italian-Society
in
BIOINFORMATICS,
VOLUME:
24,
ISSUE:
16
INDEXED IN:
Scopus
WOS
CrossRef
IN MY:
ORCID
|
ResearcherID
35
TITLE:
Temporal Logic Patterns for Querying Qualitative Models of Genetic Regulatory Networks
AUTHORS:
Pedro T Monteiro
;
Delphine Ropers
; Radu Mateescu;
Ana T Freitas
; Hidde de Jong;
PUBLISHED:
2008
,
SOURCE:
18th European Conference on Artificial Intelligence
in
ECAI 2008, PROCEEDINGS,
VOLUME:
178
INDEXED IN:
WOS
IN MY:
ORCID
|
ResearcherID
36
TITLE:
YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae
Full Text
AUTHORS:
Pedro T Monteiro
;
Nuno D Mendes
;
Miguel C Teixeira
;
Sofia d'Orey
;
Sandra Tenreiro
;
Nuno P Mira
;
Helio Pais
;
Alexandre P Francisco
;
Alexandra M Carvalho
;
Artur B Lourenco
;
Isabel Sa Correia
;
Arlindo L Oliveira
;
Ana T Freitas
;
PUBLISHED:
2008
,
SOURCE:
NUCLEIC ACIDS RESEARCH,
VOLUME:
36,
ISSUE:
SUPPL. 1
INDEXED IN:
Scopus
WOS
DBLP
CrossRef
:
111
IN MY:
ORCID
|
ResearcherID
37
TITLE:
An efficient algorithm for the identification of structured motifs in DNA promoter sequences
Full Text
AUTHORS:
Carvalho, AM
;
Freitas, AT
;
Oliveira, AL
;
Sagot, MF
;
PUBLISHED:
2006
,
SOURCE:
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS,
VOLUME:
3,
ISSUE:
2
INDEXED IN:
Scopus
WOS
DBLP
CrossRef
IN MY:
ORCID
|
ResearcherID
38
TITLE:
MUSA: a parameter free algorithm for the identification of biologically significant motifs
Full Text
AUTHORS:
Nuno D Mendes
; Ana C Casimiro;
Pedro M Santos
;
Isabel Sa Correia
;
Arlindo L Oliveira
;
Ana T Freitas
;
PUBLISHED:
2006
,
SOURCE:
BIOINFORMATICS,
VOLUME:
22,
ISSUE:
24
INDEXED IN:
Scopus
WOS
DBLP
CrossRef
IN MY:
ORCID
|
ResearcherID
39
TITLE:
The YEASTRACT database: a tool for the analysis of transcription regulatory associations in Saccharomyces cerevisiae
Full Text
AUTHORS:
Miguel C Teixeira
;
Pedro Monteiro
;
Pooja Jain
;
Sandra Tenreiro
;
Alexandra R Fernandes
;
Nuno P Mira
;
Marta Alenquer
;
Ana T Freitas
;
Arlindo L Oliveira
;
Isabel Sa Correia
;
PUBLISHED:
2006
,
SOURCE:
NUCLEIC ACIDS RESEARCH,
VOLUME:
34,
ISSUE:
Database-Issue
INDEXED IN:
Scopus
WOS
DBLP
CrossRef
IN MY:
ORCID
|
ResearcherID
40
TITLE:
A highly scalable algorithm for the extraction of cis-regulatory regions
PDF
AUTHORS:
Carvalho, AM
;
Freitas, AT
;
Oliveira, AL
;
Sagot, MF
;
PUBLISHED:
2005
,
SOURCE:
3rd Asia-Pacific Bioinformatics Conference, APBC 2005
in
Series on Advances in Bioinformatics and Computational Biology,
VOLUME:
1
INDEXED IN:
Scopus
DBLP
IN MY:
ORCID
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