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José Pedro Basto Gouveia Pereira Pinto
AuthID:
R-001-HAX
Publications
Confirmed
To Validate
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Document Type:
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Proceedings Paper (7)
Article (5)
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Confirmed Publications: 12
1
TITLE:
TNA4OptFlux - A software tool for the analysis of strain optimization strategies
Full Text
AUTHORS:
Pinto, JP
; Pereira, R;
Cardoso, J
;
Rocha, I
;
Rocha, M
;
PUBLISHED:
2013
,
SOURCE:
BMC Research Notes,
VOLUME:
6,
ISSUE:
1
INDEXED IN:
Scopus
CrossRef
:
1
IN MY:
ORCID
2
TITLE:
A study of the short and long-term regulation of E. coli metabolic pathways.
AUTHORS:
Lourenco, A
;
Carneiro, S
;
Pinto, JP
;
Rocha, M
;
Ferreira, EC
;
Rocha, I
;
PUBLISHED:
2011
,
SOURCE:
Journal of integrative bioinformatics,
VOLUME:
8,
ISSUE:
3
INDEXED IN:
Scopus
IN MY:
ORCID
3
TITLE:
Highlighting Metabolic Strategies Using Network Analysis over Strain Optimization Results
Full Text
AUTHORS:
Jose Pedro Pinto
;
Isabel Rocha
;
Miguel Rocha
;
PUBLISHED:
2011
,
SOURCE:
6th IAPR International Conference on Pattern Recognition in Bioinformatics
in
PATTERN RECOGNITION IN BIOINFORMATICS,
VOLUME:
7036
INDEXED IN:
Scopus
WOS
CrossRef
IN MY:
ORCID
4
TITLE:
Interpreting the regulatory interplay in E. Coli metabolic pathways
AUTHORS:
Lourenco, A
;
Carneiro, S
;
Pinto, JP
;
Rocha, M
;
Ferreira, EC
;
Rocha, I
;
PUBLISHED:
2011
,
SOURCE:
Advances in Intelligent and Soft Computing,
VOLUME:
93
INDEXED IN:
Scopus
CrossRef
IN MY:
ORCID
5
TITLE:
A software tool for network topology analysis under a Metabolic Engineering perspective
AUTHORS:
Pinto, JP
;
Rocha, I
;
Rocha, M
;
PUBLISHED:
2010
,
SOURCE:
2010 ACM International Conference on Bioinformatics and Computational Biology, ACM-BCB 2010
in
2010 ACM International Conference on Bioinformatics and Computational Biology, ACM-BCB 2010
INDEXED IN:
Scopus
CrossRef
IN MY:
ORCID
6
TITLE:
OptFlux: an open-source software platform for in silico metabolic engineering
Full Text
AUTHORS:
Isabel Rocha
;
Paulo Maia
;
Pedro Evangelista
;
Paulo Vilaca
; Simao Soares;
Jose P Pinto
; Jens Nielsen; Kiran R Patil;
Eugenio C Ferreira
;
Miguel Rocha
;
PUBLISHED:
2010
,
SOURCE:
BMC SYSTEMS BIOLOGY,
VOLUME:
4,
ISSUE:
1
INDEXED IN:
Scopus
WOS
CrossRef
:
278
IN MY:
ORCID
7
TITLE:
Data Integration Issues in the Reconstruction of the Genome-Scale Metabolic Model of Zymomonas Mobillis
AUTHORS:
Jose P Pinto
;
Oscar Dias
;
Analia Lourenco
;
Sonia Carneiro
;
Eugenio C Ferreira
;
Isabel Rocha
;
Miguel Rocha
;
PUBLISHED:
2009
,
SOURCE:
2nd International Workshop on Practical Applications of Computational Biology and Bioinformatics (IWPACBB 08)
in
2ND INTERNATIONAL WORKSHOP ON PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY AND BIOINFORMATICS (IWPACBB 2008),
VOLUME:
49
INDEXED IN:
Scopus
WOS
CrossRef
:
1
IN MY:
ORCID
8
TITLE:
Differential evolution for the offline and online optimization of fed-batch fermentation processes
AUTHORS:
Mendes, R
;
Rocha, I
;
Pinto, JP
;
Ferreira, EC
;
Rocha, M
;
PUBLISHED:
2008
,
SOURCE:
Studies in Computational Intelligence,
VOLUME:
143
INDEXED IN:
Scopus
CrossRef
:
5
IN MY:
ORCID
9
TITLE:
Natural computation meta-heuristics for the in silico optimization of microbial strains
Full Text
AUTHORS:
Miguel Rocha
;
Paulo Maia
;
Rui Mendes
;
Jose P Pinto
;
Eugenio C Ferreira
; Jens Nielsen; Kiran Raosaheb Patil;
Isabel Rocha
;
PUBLISHED:
2008
,
SOURCE:
BMC BIOINFORMATICS,
VOLUME:
9,
ISSUE:
1
INDEXED IN:
Scopus
WOS
CrossRef
:
79
IN MY:
ORCID
10
TITLE:
Evaluating Evolutionary Algorithms and Differential Evolution for the online optimization of fermentation processes
AUTHORS:
Rocha, M
;
Pinto, JP
;
Rocha, I
;
Ferreira, EC
;
PUBLISHED:
2007
,
SOURCE:
5th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics (EvoBIO 2007)
in
Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, Proceedings,
VOLUME:
4447
INDEXED IN:
Scopus
WOS
CrossRef
:
5
IN MY:
ORCID
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