Manuel Nuno de Sousa Pereira Simões de Melo
AuthID: R-000-A7G
1
TITLE: Two decades of Martini: Better beads, broader scope Full Text
AUTHORS: Marrink, Siewert J.; Monticelli, Luca; Melo, Manuel N.; Alessandri, Riccardo; Tieleman, D. Peter; Souza, Paulo C. T.;
PUBLISHED: 2023, SOURCE: WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE, VOLUME: 13, ISSUE: 1
AUTHORS: Marrink, Siewert J.; Monticelli, Luca; Melo, Manuel N.; Alessandri, Riccardo; Tieleman, D. Peter; Souza, Paulo C. T.;
PUBLISHED: 2023, SOURCE: WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE, VOLUME: 13, ISSUE: 1
INDEXED IN: 
Scopus 
WOS
Scopus WOS2
TITLE: Temperature-Dependent Re-alignment of the Short Multifunctional Peptide BP100 in Membranes Revealed by Solid-State NMR Spectroscopy and Molecular Dynamics Simulations Full Text
AUTHORS: Strandberg, Erik; Wadhwani, Parvesh; Buerck, Jochen; Anders, Patrick; Mink, Christian; van den Berg, Jonas; Ciriello, Raffaele A. M.; Melo, Manuel. N. N.; Castanho, Miguel A. R. B.; Bardaji, Eduard; Ulmschneider, Jakob. P. P.; Ulrich, Anne. S. S.;
PUBLISHED: 2023, SOURCE: CHEMBIOCHEM
AUTHORS: Strandberg, Erik; Wadhwani, Parvesh; Buerck, Jochen; Anders, Patrick; Mink, Christian; van den Berg, Jonas; Ciriello, Raffaele A. M.; Melo, Manuel. N. N.; Castanho, Miguel A. R. B.; Bardaji, Eduard; Ulmschneider, Jakob. P. P.; Ulrich, Anne. S. S.;
PUBLISHED: 2023, SOURCE: CHEMBIOCHEM
INDEXED IN: Scopus WOS
Scopus WOS3
TITLE: Room for improvement in the initial martini 3 parameterization of peptide interactions Full Text
AUTHORS: Spinti, J. Karl; Nunes, Fernando Neiva; Melo, Manuel N.;
PUBLISHED: 2023, SOURCE: CHEMICAL PHYSICS LETTERS, VOLUME: 819
AUTHORS: Spinti, J. Karl; Nunes, Fernando Neiva; Melo, Manuel N.;
PUBLISHED: 2023, SOURCE: CHEMICAL PHYSICS LETTERS, VOLUME: 819
INDEXED IN: Scopus WOS
Scopus WOS4
TITLE: Activity modulation of the Escherichia coli F1FO ATP synthase by a designed antimicrobial peptide via cardiolipin sequestering
AUTHORS: Makowski, Marcin; Almendro Vedia, Victor G.; Domingues, Marco M.; Franco, Octavio L.; Lopez Montero, Ivan; Melo, Manuel N.; Santos, Nuno C.;
PUBLISHED: 2023, SOURCE: ISCIENCE, VOLUME: 26, ISSUE: 7
AUTHORS: Makowski, Marcin; Almendro Vedia, Victor G.; Domingues, Marco M.; Franco, Octavio L.; Lopez Montero, Ivan; Melo, Manuel N.; Santos, Nuno C.;
PUBLISHED: 2023, SOURCE: ISCIENCE, VOLUME: 26, ISSUE: 7
INDEXED IN: Scopus WOS
Scopus WOS5
TITLE: Rotation of ATP synthases as membrane structure modulator Full Text
AUTHORS: Valdivieso Gonzalez, David; Makowski, Marcin; Pilar Lillo, M.; Cao Garcia, Francisco J.; Melo, Manuel N.; Almendro Vedia, Victor G.; Lopez Montero, Ivan;
PUBLISHED: 2023, SOURCE: EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, VOLUME: 52, ISSUE: SUPPL 1
AUTHORS: Valdivieso Gonzalez, David; Makowski, Marcin; Pilar Lillo, M.; Cao Garcia, Francisco J.; Melo, Manuel N.; Almendro Vedia, Victor G.; Lopez Montero, Ivan;
PUBLISHED: 2023, SOURCE: EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, VOLUME: 52, ISSUE: SUPPL 1
INDEXED IN: WOS
WOS6
TITLE: Testing the adhesive ability of cardiolipin on a mammalian ATP synthase dimer through molecular dynamics Full Text
AUTHORS: Makowski, Marcin; Almendro Vedia, Victor G.; Melo, Manuel N.; Lopez Montero, Ivan;
PUBLISHED: 2023, SOURCE: EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, VOLUME: 52, ISSUE: SUPPL 1
AUTHORS: Makowski, Marcin; Almendro Vedia, Victor G.; Melo, Manuel N.; Lopez Montero, Ivan;
PUBLISHED: 2023, SOURCE: EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, VOLUME: 52, ISSUE: SUPPL 1
INDEXED IN: WOS
WOS7
TITLE: Rotation of the <i>c</i>-Ring Promotes the Curvature Sorting of Monomeric ATP Synthases
AUTHORS: Valdivieso Gonzalez, David; Makowski, Marcin; Lillo, M. Pilar; Cao Garcia, Francisco J.; Melo, Manuel N.; Almendro Vedia, Victor G.; Lopez Montero, Ivan;
PUBLISHED: 2023, SOURCE: ADVANCED SCIENCE
AUTHORS: Valdivieso Gonzalez, David; Makowski, Marcin; Lillo, M. Pilar; Cao Garcia, Francisco J.; Melo, Manuel N.; Almendro Vedia, Victor G.; Lopez Montero, Ivan;
PUBLISHED: 2023, SOURCE: ADVANCED SCIENCE
INDEXED IN: WOS
WOS8
TITLE: Martini 3 Coarse-Grained Force Field for Cholesterol Full Text
AUTHORS: Borges Araujo, Luis; Borges Araujo, Ana C.; Ozturk, Tugba Nur; Ramirez Echemendia, Daniel P.; Fabian, Balazs; Carpenter, Timothy S.; Thallmair, Sebastian; Barnoud, Jonathan; Ingolfsson, Helgi I.; Hummer, Gerhard; Tieleman, D. Peter; Marrink, Siewert J.; Souza, Paulo C. T.; Melo, Manuel N.;
PUBLISHED: 2023, SOURCE: JOURNAL OF CHEMICAL THEORY AND COMPUTATION, VOLUME: 19, ISSUE: 20
AUTHORS: Borges Araujo, Luis; Borges Araujo, Ana C.; Ozturk, Tugba Nur; Ramirez Echemendia, Daniel P.; Fabian, Balazs; Carpenter, Timothy S.; Thallmair, Sebastian; Barnoud, Jonathan; Ingolfsson, Helgi I.; Hummer, Gerhard; Tieleman, D. Peter; Marrink, Siewert J.; Souza, Paulo C. T.; Melo, Manuel N.;
PUBLISHED: 2023, SOURCE: JOURNAL OF CHEMICAL THEORY AND COMPUTATION, VOLUME: 19, ISSUE: 20
INDEXED IN: WOS
WOS9
TITLE: Improved Parameterization of Phosphatidylinositide Lipid Headgroups for the Martini 3 Coarse-Grain Force Field Full Text
AUTHORS: Borges Araujo, Luis; Souza, Paulo C. T.; Fernandes, Fabio; Melo, Manuel N.;
PUBLISHED: 2022, SOURCE: JOURNAL OF CHEMICAL THEORY AND COMPUTATION, VOLUME: 18, ISSUE: 1
AUTHORS: Borges Araujo, Luis; Souza, Paulo C. T.; Fernandes, Fabio; Melo, Manuel N.;
PUBLISHED: 2022, SOURCE: JOURNAL OF CHEMICAL THEORY AND COMPUTATION, VOLUME: 18, ISSUE: 1
INDEXED IN: WOS
WOS10
TITLE: Parainfluenza Fusion Peptide Promotes Membrane Fusion by Assembling into Oligomeric Porelike Structures Full Text
AUTHORS: Valerio, Mariana; Mendonca, Diogo A.; Morais, Joao; Buga, Carolina C.; Cruz, Carlos H.; Castanho, Miguel A. R. B.; Melo, Manuel N.; Soares, Claudio M.; Veiga, Ana Salome; Lousa, Diana;
PUBLISHED: 2022, SOURCE: ACS CHEMICAL BIOLOGY, VOLUME: 17, ISSUE: 7
AUTHORS: Valerio, Mariana; Mendonca, Diogo A.; Morais, Joao; Buga, Carolina C.; Cruz, Carlos H.; Castanho, Miguel A. R. B.; Melo, Manuel N.; Soares, Claudio M.; Veiga, Ana Salome; Lousa, Diana;
PUBLISHED: 2022, SOURCE: ACS CHEMICAL BIOLOGY, VOLUME: 17, ISSUE: 7
