Claudine Chaouiya
AuthID: R-000-T6V
1
TITLE: Logical Modelling, Some Recent Methodological Advances Illustrated
AUTHORS: Chaouiya, Claudine; Monteiro, Pedro T.; Remy, Elisabeth;
PUBLISHED: 2024, SOURCE: 30th IFIP WG 1.5 International Workshop on Cellular Automata and Discrete Complex Systems (AUTOMATA) in CELLULAR AUTOMATA AND DISCRETE COMPLEX SYSTEMS, AUTOMATA 2024, VOLUME: 14782
AUTHORS: Chaouiya, Claudine; Monteiro, Pedro T.; Remy, Elisabeth;
PUBLISHED: 2024, SOURCE: 30th IFIP WG 1.5 International Workshop on Cellular Automata and Discrete Complex Systems (AUTOMATA) in CELLULAR AUTOMATA AND DISCRETE COMPLEX SYSTEMS, AUTOMATA 2024, VOLUME: 14782
2
TITLE: YEASTRACT plus : a portal for the exploitation of global transcription regulation and metabolic model data in yeast biotechnology and pathogenesis
AUTHORS: Teixeira, Miguel Cacho; Viana, Romeu; Palma, Margarida; Oliveira, Jorge; Galocha, Monica; Mota, Marta Neves; Couceiro, Diogo; Pereira, Maria Galhardas; Antunes, Miguel; Costa, Ines, V; Pais, Pedro; Parada, Carolina; Chaouiya, Claudine; Sa Correia, Isabel; Monteiro, Pedro Tiago;
PUBLISHED: 2022, SOURCE: NUCLEIC ACIDS RESEARCH, VOLUME: 51, ISSUE: D1
AUTHORS: Teixeira, Miguel Cacho; Viana, Romeu; Palma, Margarida; Oliveira, Jorge; Galocha, Monica; Mota, Marta Neves; Couceiro, Diogo; Pereira, Maria Galhardas; Antunes, Miguel; Costa, Ines, V; Pais, Pedro; Parada, Carolina; Chaouiya, Claudine; Sa Correia, Isabel; Monteiro, Pedro Tiago;
PUBLISHED: 2022, SOURCE: NUCLEIC ACIDS RESEARCH, VOLUME: 51, ISSUE: D1
3
TITLE: Addressing barriers in comprehensiveness, accessibility, reusability, interoperability and reproducibility of computational models in systems biology
AUTHORS: Anna Niarakis; Dagmar Waltemath; James Glazier; Falk Schreiber; Sarah M Keating; David Nickerson; Claudine Chaouiya; Anne Siegel; Vincent Noël; Henning Hermjakob; Tomáš Helikar; Sylvain Soliman; Laurence Calzone;
PUBLISHED: 2022, SOURCE: Briefings in Bioinformatics, VOLUME: 23, ISSUE: 4
AUTHORS: Anna Niarakis; Dagmar Waltemath; James Glazier; Falk Schreiber; Sarah M Keating; David Nickerson; Claudine Chaouiya; Anne Siegel; Vincent Noël; Henning Hermjakob; Tomáš Helikar; Sylvain Soliman; Laurence Calzone;
PUBLISHED: 2022, SOURCE: Briefings in Bioinformatics, VOLUME: 23, ISSUE: 4
4
TITLE: Computational modelling in health and disease: highlights of the 6th annual SysMod meeting
AUTHORS: Anna Niarakis; Juilee Thakar; Matteo Barberis; María Rodríguez Martínez; Tomáš Helikar; Marc Birtwistle; Claudine Chaouiya; Laurence Calzone; Andreas Dräger;
PUBLISHED: 2022, SOURCE: Bioinformatics, VOLUME: 38, ISSUE: 21
AUTHORS: Anna Niarakis; Juilee Thakar; Matteo Barberis; María Rodríguez Martínez; Tomáš Helikar; Marc Birtwistle; Claudine Chaouiya; Laurence Calzone; Andreas Dräger;
PUBLISHED: 2022, SOURCE: Bioinformatics, VOLUME: 38, ISSUE: 21
5
TITLE: In Silico Logical Modelling to Uncover Cooperative Interactions in Cancer Full Text
AUTHORS: Selvaggio, G; Chaouiya, C; Janody, F;
PUBLISHED: 2021, SOURCE: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, VOLUME: 22, ISSUE: 9
AUTHORS: Selvaggio, G; Chaouiya, C; Janody, F;
PUBLISHED: 2021, SOURCE: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, VOLUME: 22, ISSUE: 9
6
TITLE: SysMod: the ISCB community for data-driven computational modelling and multi-scale analysis of biological systems Full Text
AUTHORS: Drager, A; Helikar, T; Barberis, M; Birtwistle, M; Calzone, L; Chaouiya, C; Hasenauer, J; Karr, JR; Niarakis, A; Martinez, MR; Saez Rodriguez, J; Thakar, J;
PUBLISHED: 2021, SOURCE: BIOINFORMATICS, VOLUME: 37, ISSUE: 21
AUTHORS: Drager, A; Helikar, T; Barberis, M; Birtwistle, M; Calzone, L; Chaouiya, C; Hasenauer, J; Karr, JR; Niarakis, A; Martinez, MR; Saez Rodriguez, J; Thakar, J;
PUBLISHED: 2021, SOURCE: BIOINFORMATICS, VOLUME: 37, ISSUE: 21
INDEXED IN: 
WOS
WOS7
TITLE: In Silico Logical Modelling to Uncover Cooperative Interactions in Cancer Full Text
AUTHORS: Gianluca Selvaggio; Claudine Chaouiya; Florence Janody;
PUBLISHED: 2021, SOURCE: International Journal of Molecular Sciences, VOLUME: 22, ISSUE: 9
AUTHORS: Gianluca Selvaggio; Claudine Chaouiya; Florence Janody;
PUBLISHED: 2021, SOURCE: International Journal of Molecular Sciences, VOLUME: 22, ISSUE: 9
8
TITLE: Hybrid Epithelial-Mesenchymal Phenotypes Are Controlled by Microenvironmental Factors
AUTHORS: Selvaggio, G; Canato, S; Pawar, A; Monteiro, PT; Guerreiro, PS; Bras, MM; Janody, F; Chaouiya, C;
PUBLISHED: 2020, SOURCE: CANCER RESEARCH, VOLUME: 80, ISSUE: 11
AUTHORS: Selvaggio, G; Canato, S; Pawar, A; Monteiro, PT; Guerreiro, PS; Bras, MM; Janody, F; Chaouiya, C;
PUBLISHED: 2020, SOURCE: CANCER RESEARCH, VOLUME: 80, ISSUE: 11
9
TITLE: SBML Level 3: an extensible format for the exchange and reuse of biological models
AUTHORS: Keating, SM; Waltemath, D; König, M; Zhang, F; Dräger, A; Chaouiya, C; Bergmann, FT; Finney, A; Gillespie, CS; Helikar, T; Hoops, S; Malik Sheriff, RS; Moodie, SL; Moraru, II; Myers, CJ; Naldi, A; Olivier, BG; Sahle, S; Schaff, JC; Smith, LP; ...More
PUBLISHED: 2020, SOURCE: MOLECULAR SYSTEMS BIOLOGY, VOLUME: 16, ISSUE: 8
AUTHORS: Keating, SM; Waltemath, D; König, M; Zhang, F; Dräger, A; Chaouiya, C; Bergmann, FT; Finney, A; Gillespie, CS; Helikar, T; Hoops, S; Malik Sheriff, RS; Moodie, SL; Moraru, II; Myers, CJ; Naldi, A; Olivier, BG; Sahle, S; Schaff, JC; Smith, LP; ...More
PUBLISHED: 2020, SOURCE: MOLECULAR SYSTEMS BIOLOGY, VOLUME: 16, ISSUE: 8
10
TITLE: Assessing regulatory features of the current transcriptional network of Saccharomyces cerevisiae
AUTHORS: Monteiro, PT; Pedreira, T; Galocha, M; Teixeira, MC; Chaouiya, C;
PUBLISHED: 2020, SOURCE: SCIENTIFIC REPORTS, VOLUME: 10, ISSUE: 1
AUTHORS: Monteiro, PT; Pedreira, T; Galocha, M; Teixeira, MC; Chaouiya, C;
PUBLISHED: 2020, SOURCE: SCIENTIFIC REPORTS, VOLUME: 10, ISSUE: 1
