ProfileOfResearchers

Identified 138

TITLE: Explaining protein-protein interactions with knowledge graph-based semantic similarity Full Text
AUTHORS: Sousa, Rita T.; Silva, Sara; Pesquita, Catia;
PUBLISHED: 2024, SOURCE: COMPUTERS IN BIOLOGY AND MEDICINE, VOLUME: 170

INDEXED IN:

Scopus

WOS

CrossRef: 1

IN MY:

ORCID

TITLE: Knowledge Graph Embeddings for ICU readmission prediction Full Text
AUTHORS: Carvalho, Ricardo M. S.; Oliveira, Daniela; Pesquita, Catia;
PUBLISHED: 2023, SOURCE: BMC MEDICAL INFORMATICS AND DECISION MAKING, VOLUME: 23, ISSUE: 1

INDEXED IN:

Scopus

WOS

TITLE: The Immunopeptidome from a Genomic Perspective: Establishing the Noncanonical Landscape of MHC Class I-Associated Peptides
AUTHORS: Bedran, Georges; Gasser, Hans Christof; Weke, Kenneth; Wang, Tongjie; Bedran, Dominika; Laird, Alexander; Battail, Christophe; Zanzotto, Fabio Massimo; Pesquita, Catia; Axelson, Hakan; Rajan, Ajitha; Harrison, David J.; Palkowski, Aleksander; Pawlik, Maciej; Parys, Maciej; O'Neill, Robert; Brennan, Paul M.; Symeonides, Stefan N.; Goodlett, David R.; Litchfield, Kevin; Fahraeus, Robin; Hupp, Ted R.; Kote, Sachin; Alfaro, Javier A.; ...More
PUBLISHED: 2023, SOURCE: CANCER IMMUNOLOGY RESEARCH, VOLUME: 11, ISSUE: 6

INDEXED IN:

Scopus

WOS

CrossRef: 6

IN MY:

ORCID

TITLE: Multi-domain knowledge graph embeddings for gene-disease association prediction Full Text
AUTHORS: Nunes, Susana; Sousa, Rita T.; Pesquita, Catia;
PUBLISHED: 2023, SOURCE: JOURNAL OF BIOMEDICAL SEMANTICS, VOLUME: 14, ISSUE: 1

INDEXED IN:

Scopus

WOS

TITLE: Explainable Representations for Relation Prediction in Knowledge Graphs
AUTHORS: Rita Sousa; Sara Silva; Catia Pesquita;
PUBLISHED: 2023, SOURCE: 20th International Conference on Principles of Knowledge Representation and Reasoning, KR 2023 in Proceedings of the International Conference on Knowledge Representation and Reasoning

INDEXED IN:

Scopus

TITLE: Preface
AUTHORS: Catia Pesquita; Hala Skaf Molli; Vasilis Efthymiou; Sabrina Kirrane; Axel Ngonga; Diego Collarana; Renato Cerqueira; Mehwish Alam; Cassia Trojahn; Sven Hertling;
PUBLISHED: 2023, SOURCE: 20th Extended Semantic Web Conference, ESWC 2023 in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), VOLUME: 13998 LNCS

INDEXED IN:

Scopus

TITLE: Biomedical Knowledge Graph Embeddings with Negative Statements
AUTHORS: Sousa, Rita T.; Silva, Sara; Paulheim, Heiko; Pesquita, Catia;
PUBLISHED: 2023, SOURCE: 22nd International Semantic Web Conference (ISWC) in SEMANTIC WEB, ISWC 2023, PART I, VOLUME: 14265

INDEXED IN:

Scopus

WOS

CrossRef: 1

IN MY:

ORCID

TITLE: Supplementary notes from The Immunopeptidome from a Genomic Perspective: Establishing the Noncanonical Landscape of MHC Class I–Associated Peptides
AUTHORS: Georges Bedran; Hans-Christof Gasser; Kenneth Weke; Tongjie Wang; Dominika Bedran; Alexander Laird; Christophe Battail; Fabio Massimo Zanzotto; Catia Pesquita; Håkan Axelson; Ajitha Rajan; David J Harrison; Aleksander Palkowski; Maciej Pawlik; Maciej Parys; Robert R O'Neill; Paul M Brennan; Stefan N Symeonides; David R Goodlett; Kevin Litchfield; Robin Fahraeus; Ted R Hupp; Sachin Kote; Javier A Alfaro; ...More
PUBLISHED: 2023

INDEXED IN:

CrossRef

IN MY:

ORCID

TITLE: Supplementary legends from The Immunopeptidome from a Genomic Perspective: Establishing the Noncanonical Landscape of MHC Class I–Associated Peptides
AUTHORS: Georges Bedran; Hans-Christof Gasser; Kenneth Weke; Tongjie Wang; Dominika Bedran; Alexander Laird; Christophe Battail; Fabio Massimo Zanzotto; Catia Pesquita; Håkan Axelson; Ajitha Rajan; David J Harrison; Aleksander Palkowski; Maciej Pawlik; Maciej Parys; Robert R O'Neill; Paul M Brennan; Stefan N Symeonides; David R Goodlett; Kevin Litchfield; Robin Fahraeus; Ted R Hupp; Sachin Kote; Javier A Alfaro; ...More
PUBLISHED: 2023

INDEXED IN:

CrossRef

IN MY:

ORCID