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TITLE: Amphioxus functional genomics and the origins of vertebrate gene regulation  Full Text
AUTHORS: Ferdinand Marletaz; Panos N Firbas; Ignacio Maeso; Juan J Tena; Ozren Bogdanovic; Malcolm Perry; Christopher D R Wyatt; Elisa de la Calle Mustienes; Stephanie Bertrand; Demian Burguera; Rafael D Acemel; Simon J van Heeringen; Silvia Naranjo; Carlos Herrera Ubeda; Ksenia Skvortsova; Sandra Jimenez Gancedo; Daniel Aldea; Yamile Marquez; Lorena Buono; Iryna Kozmikova; Jon Permanyer; Alexandra Louis; Beatriz Albuixech Crespo; Yann Le Petillon; Anthony Leon; Lucie Subirana; Piotr J Balwierz; Paul Edward Duckett; Ensieh Farahani; Jean Marc Aury; Sophie Mangenot; Patrick Wincker; Ricard Albalat; Elia Benito Gutierrez; Cristian Canestro; Filipe Castro ; Salvatore D'Aniello; David E K Ferrier; Shengfeng F Huang; Vincent Laudet; Gabriel A B Marais; Pierre Pontarotti; Michael Schubert; Herve Seitz; Ildiko Somorjai; Tokiharu Takahashi; Olivier Mirabeau; Anlong L Xu; Jr Kai Yu; Piero Carninci; Juan R Ramon Martinez Morales; Hugues Roest Crollius; Zbynek Kozmik; Matthew T Weirauch; Jordi Garcia Fernandez; Ryan Lister; Boris Lenhard; Peter W H Holland; Hector Escriva; Jose L Luis Gomez Skarmeta; Manuel Irimia; ...More
PUBLISHED: 2018, SOURCE: NATURE, VOLUME: 564, ISSUE: 7734
INDEXED IN: WOS
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TITLE: Widespread intron retention in mammals functionally tunes transcriptomes
AUTHORS: Ulrich Braunschweig; Nuno L Barbosa Morais; Qun Pan; Emil N Nachman; Babak Alipanahi; Thomas Gonatopoulos Pournatzis; Brendan Frey; Manuel Irimia; Benjamin J Blencowe;
PUBLISHED: 2014, SOURCE: GENOME RESEARCH, VOLUME: 24, ISSUE: 11
INDEXED IN: WOS CrossRef
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TITLE: Stability Depends on Positive Autoregulation in Boolean Gene Regulatory Networks  Full Text
AUTHORS: Ricardo Pinho; Victor Garcia; Manuel Irimia; Marcus W Feldman;
PUBLISHED: 2014, SOURCE: PLOS COMPUTATIONAL BIOLOGY, VOLUME: 10, ISSUE: 11
INDEXED IN: Scopus WOS CrossRef
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TITLE: MBNL proteins repress ES-cell-specific alternative splicing and reprogramming  Full Text
AUTHORS: Hong Han; Manuel Irimia; Pedro J. Rosa ; Hoon Ki Sung; Babak Alipanahi; Laurent David; Azadeh Golipour; Mathieu Gabut; Iacovos P Michael; Emil N Nachman; Eric Wang; Dan Trcka; Tadeo Thompson; Dave O'Hanlon; Valentina Slobodeniuc; Nuno L Barbosa Morais; Christopher B Burge; Jason Moffat; Brendan J Frey; Andras Nagy; James Ellis; Jeffrey L Wrana; Benjamin J Blencowe; ...More
PUBLISHED: 2013, SOURCE: NATURE, VOLUME: 498, ISSUE: 7453
INDEXED IN: Scopus WOS CrossRef: 219
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TITLE: The Evolutionary Landscape of Alternative Splicing in Vertebrate Species
AUTHORS: Nuno L Barbosa Morais; Manuel Irimia; Qun Pan; Hui Y Xiong; Serge Gueroussov; Leo J Lee; Valentina Slobodeniuc; Claudia Kutter; Stephen Watt; Recep Colak; TaeHyung Kim; Christine M Misquitta Ali; Michael D Wilson; Philip M Kim; Duncan T Odom; Brendan J Frey; Benjamin J Blencowe;
PUBLISHED: 2012, SOURCE: SCIENCE, VOLUME: 338, ISSUE: 6114
INDEXED IN: Scopus WOS