Joana Sofia de Pinho Gonçalves
AuthID: R-001-JPS
1
TITLE: The YEASTRACT database: an upgraded information system for the analysis of gene and genomic transcription regulation in Saccharomyces cerevisiae Full Text
AUTHORS: Miguel Cacho Teixeira; Pedro Tiago Monteiro ; Joana Fernandes Guerreiro; Joana Pinho Goncalves; Nuno Pereira Mira; Sandra Costa dos Santos; Tania Rodrigues Cabrito; Margarida Palma; Catarina Costa; Alexandre Paulo Francisco ; Sara Cordeiro Madeira ; Arlindo Limede Oliveira ; Ana Teresa Freitas ; Isabel Sa Correia;
PUBLISHED: 2014, SOURCE: NUCLEIC ACIDS RESEARCH, VOLUME: 42, ISSUE: D1
AUTHORS: Miguel Cacho Teixeira; Pedro Tiago Monteiro ; Joana Fernandes Guerreiro; Joana Pinho Goncalves; Nuno Pereira Mira; Sandra Costa dos Santos; Tania Rodrigues Cabrito; Margarida Palma; Catarina Costa; Alexandre Paulo Francisco ; Sara Cordeiro Madeira ; Arlindo Limede Oliveira ; Ana Teresa Freitas ; Isabel Sa Correia;
PUBLISHED: 2014, SOURCE: NUCLEIC ACIDS RESEARCH, VOLUME: 42, ISSUE: D1
2
TITLE: LateBiclustering: Efficient Heuristic Algorithm for Time-Lagged Bicluster Identification Full Text
AUTHORS: Joana P Goncalves; Sara C Madeira ;
PUBLISHED: 2014, SOURCE: IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, VOLUME: 11, ISSUE: 5
AUTHORS: Joana P Goncalves; Sara C Madeira ;
PUBLISHED: 2014, SOURCE: IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, VOLUME: 11, ISSUE: 5
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TITLE: Interactogeneous: Disease Gene Prioritization Using Heterogeneous Networks and Full Topology Scores Full Text
AUTHORS: Joana P Goncalves; Alexandre P Francisco ; Yves Moreau; Sara C Madeira ;
PUBLISHED: 2012, SOURCE: PLOS ONE, VOLUME: 7, ISSUE: 11
AUTHORS: Joana P Goncalves; Alexandre P Francisco ; Yves Moreau; Sara C Madeira ;
PUBLISHED: 2012, SOURCE: PLOS ONE, VOLUME: 7, ISSUE: 11
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TITLE: Regulatory Snapshots: Integrative Mining of Regulatory Modules from Expression Time Series and Regulatory Networks Full Text
AUTHORS: Goncalves, JP; Aires, RS; Francisco, AP ; Madeira, SC ;
PUBLISHED: 2012, SOURCE: PLOS ONE, VOLUME: 7, ISSUE: 5
AUTHORS: Goncalves, JP; Aires, RS; Francisco, AP ; Madeira, SC ;
PUBLISHED: 2012, SOURCE: PLOS ONE, VOLUME: 7, ISSUE: 5
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TITLE: AliBiMotif: Integrating alignment and biclustering to unravel Transcription Factor Binding Sites in DNA sequences
AUTHORS: Joana P Goncalves; Yves Moreau; Sara C Madeira ;
PUBLISHED: 2012, SOURCE: INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, VOLUME: 6, ISSUE: 2
AUTHORS: Joana P Goncalves; Yves Moreau; Sara C Madeira ;
PUBLISHED: 2012, SOURCE: INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, VOLUME: 6, ISSUE: 2
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TITLE: TFRank: network-based prioritization of regulatory associations underlying transcriptional responses Full Text
AUTHORS: Joana P Goncalves; Alexandre P Francisco ; Nuno P Mira ; Miguel C Teixeira ; Isabel Sa Correia ; Arlindo L Oliveira ; Sara C Madeira ;
PUBLISHED: 2011, SOURCE: BIOINFORMATICS, VOLUME: 27, ISSUE: 22
AUTHORS: Joana P Goncalves; Alexandre P Francisco ; Nuno P Mira ; Miguel C Teixeira ; Isabel Sa Correia ; Arlindo L Oliveira ; Sara C Madeira ;
PUBLISHED: 2011, SOURCE: BIOINFORMATICS, VOLUME: 27, ISSUE: 22
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TITLE: PINTA: a web server for network-based gene prioritization from expression data Full Text
AUTHORS: Daniela Nitsch; Leon Charles Tranchevent; Joana P Goncalves; Josef Korbinian Vogt; Sara C Madeira ; Yves Moreau;
PUBLISHED: 2011, SOURCE: NUCLEIC ACIDS RESEARCH, VOLUME: 39, ISSUE: SUPPL. 2
AUTHORS: Daniela Nitsch; Leon Charles Tranchevent; Joana P Goncalves; Josef Korbinian Vogt; Sara C Madeira ; Yves Moreau;
PUBLISHED: 2011, SOURCE: NUCLEIC ACIDS RESEARCH, VOLUME: 39, ISSUE: SUPPL. 2
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TITLE: Candidate gene prioritization by network analysis of differential expression using machine learning approaches Full Text
AUTHORS: Daniela Nitsch; Joana P Goncalves; Fabian Ojeda; Bart de Moor; Yves Moreau;
PUBLISHED: 2010, SOURCE: BMC BIOINFORMATICS, VOLUME: 11, ISSUE: 1
AUTHORS: Daniela Nitsch; Joana P Goncalves; Fabian Ojeda; Bart de Moor; Yves Moreau;
PUBLISHED: 2010, SOURCE: BMC BIOINFORMATICS, VOLUME: 11, ISSUE: 1
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TITLE: e-BiMotif: Combining Sequence Alignment and Biclustering to Unravel Structured Motifs Full Text
AUTHORS: Joana P Goncalves; Sara C Madeira ;
PUBLISHED: 2010, SOURCE: 4th International Workshop on Practical Applications of Computational Biology & Bioinformatics in ADVANCES IN BIOINFORMATICS, VOLUME: 74
AUTHORS: Joana P Goncalves; Sara C Madeira ;
PUBLISHED: 2010, SOURCE: 4th International Workshop on Practical Applications of Computational Biology & Bioinformatics in ADVANCES IN BIOINFORMATICS, VOLUME: 74
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TITLE: POLAR MAPPER: a computational tool for integrated visualization of protein interaction networks and mRNA expression data
AUTHORS: Joana P Goncalves; Mario Graos; Andre X C N Valente;
PUBLISHED: 2009, SOURCE: JOURNAL OF THE ROYAL SOCIETY INTERFACE, VOLUME: 6, ISSUE: 39
AUTHORS: Joana P Goncalves; Mario Graos; Andre X C N Valente;
PUBLISHED: 2009, SOURCE: JOURNAL OF THE ROYAL SOCIETY INTERFACE, VOLUME: 6, ISSUE: 39
