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TITLE: Using genomics to understand the origin and dispersion of multidrug and extensively drug resistant tuberculosis in Portugal  Full Text
AUTHORS: Perdigao, J; Gomes, P; Miranda, A; Maltez, F; Machado, D; Silva, C; Phelan, JE; Brum, L; Campino, S; Couto, I; Miguel Viveiros ; Clark, TG; Portugal, I;
PUBLISHED: 2020, SOURCE: SCIENTIFIC REPORTS, VOLUME: 10, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 13 Handle
IN MY: ORCID
2
TITLE: Emergence of multidrug-resistantMycobacterium tuberculosisof the Beijing lineage in Portugal and Guinea-Bissau: a snapshot of moving clones by whole-genome sequencing
AUTHORS: Joao Perdigao; Carla Silva; Fernando Maltez; Diana Machado; Anabela Miranda; Isabel Couto; Paulo Rabna; Paola Florez de Sessions; Jody Phelan; Arnab Pain; Ruth McNerney; Martin L Hibberd; Igor Mokrousov; Taane G Clark; Miguel Viveiros ; Isabel Portugal;
PUBLISHED: 2020, SOURCE: EMERGING MICROBES & INFECTIONS, VOLUME: 9, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 10
IN MY: ORCID
3
TITLE: Genome-wide analysis of Mycobacterium tuberculosis polymorphisms reveals lineage-specific associations with drug resistance  Full Text
AUTHORS: Oppong, YEA; Phelan, J; Perdigao, J; Machado, D; Miranda, A; Portugal, I; Miguel Viveiros ; Clark, TG; Hibberd, ML;
PUBLISHED: 2019, SOURCE: BMC GENOMICS, VOLUME: 20, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef Handle
IN MY: ORCID
4
TITLE: Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis
AUTHORS: Coll, F; Phelan, J; Hill Cawthorne, GA; Nair, MB; Mallard, K; Ali, S; Abdallah, AM; Alghamdi, S; Alsomali, M; Ahmed, AO; Portelli, S; Oppong, Y; Alves, A; Bessa, TB; Campino, S; Caws, M; Chatterjee, A; Crampin, AC; Dheda, K; Furnham, N; Glynn, JR; Grandjean, L; Ha, DM; Hasan, R; Hasan, Z; Hibberd, ML; Joloba, M; Jones Lopez, EC; Matsumoto, T; Miranda, A; Moore, DJ; Mocillo, N; Panaiotov, S; Parkhill, J; Penha, C; Perdigao, J; Portugal, I; Rchiad, Z; Robledo, J; Sheen, P; Shesha, NT; Sirgel, FA; Sola, C; Sousa, EO; Streicher, EM; Van Helden, P; Miguel Viveiros ; Warren, RM; McNerney, R; Pain, A; Clark, TG; ...More
PUBLISHED: 2018, SOURCE: NATURE GENETICS, VOLUME: 50, ISSUE: 2
INDEXED IN: Scopus WOS CrossRef: 211
IN MY: ORCID
5
TITLE: Recombination in pe/ppe genes contributes to genetic variation in Mycobacterium tuberculosis lineages  Full Text
AUTHORS: Phelan, JE; Coll, F; Bergval, I; Anthony, RM; Warren, R; Sampson, SL; van Pittius, NCG; Glynn, JR; Crampin, AC; Alves, A; Bessa, TB; Campino, S; Dheda, K; Grandjean, L; Hasan, R; Hasan, Z; Miranda, A; Moore, D; Panaiotov, S; Perdigao, J; Portugal, I; Sheen, P; Sousa, ED; Streicher, EM; van Helden, PD; Miguel Viveiros ; Hibberd, ML; Pain, A; McNerney, R; Clark, TG; ...More
PUBLISHED: 2016, SOURCE: BMC GENOMICS, VOLUME: 17, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 52
IN MY: ORCID
6
TITLE: Rapid determination of anti-tuberculosis drug resistance from whole-genome sequences  Full Text
AUTHORS: Coll, F; McNerney, R; Preston, MD; Guerra Assuncao, JA; Warry, A; Hill Cawthorne, G; Mallard, K; Nair, M; Miranda, A; Alves, A; Perdigao, J; Miguel Viveiros ; Portugal, I; Hasan, Z; Hasan, R; Glynn, JR; Martin, N; Pain, A; Clark, TG;
PUBLISHED: 2015, SOURCE: GENOME MEDICINE, VOLUME: 7, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 276 Handle
IN MY: ORCID
7
TITLE: Second worldwide proficiency study on variable number of tandem repeats typing of Mycobacterium tuberculosis complex
AUTHORS: De Beer, JL; Kodmon, C; Van Ingen, J; Supply, P; Van Soolingen, D; Jamieson, FB; Bidovec Stojkovic, U; Brown, T; Cirillo, DM; Cruz, L; Miranda, A; Dou, HY; Fauville Dufaux, M; Fitzgibbon, MM; Garcia De Viedma, D; Groenheit, R; Haanpera Heikkinen, M; Indra, A; Kam, KM; Kramer, R; Jiang, GL; Niemann, S; Obrovac, M; Rasmussen, EM; Refregier, G; Realpe, T; Samper, S; Sharma, MK; Sougakoff, W; Stakenas, P; Stavrum, R; Trenkler, J; Wada, T; Siame, KK; Tafaj, S; Cowan, L; Sng, LH; Seagar, AL; Basu, I; Rastogi, N; Ferro, BE; De Matos, F; Kipnis, A; Van Soolingen, D; Supply, P; ...More
PUBLISHED: 2014, SOURCE: International Journal of Tuberculosis and Lung Disease, VOLUME: 18, ISSUE: 5
INDEXED IN: Scopus
IN MY: ORCID
8
TITLE: SNP typing reveals similarity in Mycobacterium tuberculosis genetic diversity between Portugal and Northeast Brazil  Full Text
AUTHORS: Lopes, JS ; Marques, I; Soares, P; Nebenzahl Guimaraes, H; Costa, J; Miranda, A; Duarte, R ; Alves, A; Macedo, R; Duarte, TA; Barbosa, T; Oliveira, M; Nery, JS; Boechat, N; Pereira, SM; Barreto, ML; Pereira Leal, J ; Gomes, MGM ; Penha Goncalves, C ;
PUBLISHED: 2013, SOURCE: INFECTION GENETICS AND EVOLUTION, VOLUME: 18
INDEXED IN: Scopus WOS CrossRef Handle
IN MY: ORCID
9
TITLE: TUBERCULOSIS IN A CHILD - SEARCH FOR THE INFECTED ADULT NEARBY; CASE REPORT, PORTUGAL, 2007
AUTHORS: Duarte, R ; Tavares, E; Miranda, A; Carvalho, A;
PUBLISHED: 2009, SOURCE: EUROSURVEILLANCE, VOLUME: 14, ISSUE: 36
INDEXED IN: Scopus WOS
IN MY: ORCID
10
TITLE: Tuberculosis in a shopping centre, Portugal, 2004-5.
AUTHORS: Duarte, R ; Miranda, A; Braga, R; Carvalho, A; Rola, J; Marques, A; Barros, H ;
PUBLISHED: 2008, SOURCE: Euro surveillance : bulletin européen sur les maladies transmissibles = European communicable disease bulletin, VOLUME: 13, ISSUE: 42
INDEXED IN: Scopus
IN MY: ORCID
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