Emanuel José Vieira Gonçalves
AuthID: R-00J-VCM
1
TITLE: Machine learning-based analysis of genomic and transcriptomic data unveils sarcoma clusters with superlative prognostic and predictive value
AUTHORS: Miguel Esperança-Martins; Hugo Vasques; Manuel Sokolov Ravasqueira; Maria Manuel Lemos; Filipa Fonseca; Diogo Coutinho; Jorge Antonio López; Richard S.P Huang; Sérgio Dias; Lina Gallego-Paez; Luís Costa; Nuno Abecasis; Gonçalves, Emanuel; Isabel Fernandes;
PUBLISHED: 2025
AUTHORS: Miguel Esperança-Martins; Hugo Vasques; Manuel Sokolov Ravasqueira; Maria Manuel Lemos; Filipa Fonseca; Diogo Coutinho; Jorge Antonio López; Richard S.P Huang; Sérgio Dias; Lina Gallego-Paez; Luís Costa; Nuno Abecasis; Gonçalves, Emanuel; Isabel Fernandes;
PUBLISHED: 2025
2
TITLE: Corrigendum to “Post-translational regulation of metabolism in fumarate hydratase deficient cancer cells” [Metabol. Eng. 45 (2018) 149–157, (S1096717617303270), (10.1016/j.ymben.2017.11.011)] Full Text
AUTHORS: Gonçalves, Emanuel; Marco Sciacovelli; Ana S H Costa; Maxine Gia Binh Tran; Timothy Isaac Johnson; Daniel Machado; Christian Frezza; Julio Saez Rodriguez;
PUBLISHED: 2024, SOURCE: Metabolic Engineering
AUTHORS: Gonçalves, Emanuel; Marco Sciacovelli; Ana S H Costa; Maxine Gia Binh Tran; Timothy Isaac Johnson; Daniel Machado; Christian Frezza; Julio Saez Rodriguez;
PUBLISHED: 2024, SOURCE: Metabolic Engineering
INDEXED IN: 
Scopus
Scopus3
TITLE: A comprehensive clinically informed map of dependencies in cancer cells and framework for target prioritization
AUTHORS: Clare Pacini; Emma Duncan; Gonçalves, Emanuel; James Gilbert; Shriram Bhosle; Stuart Horswell; Emre Karakoc; Howard Lightfoot; Ed Curry; Francesc Muyas; Monsif Bouaboula; Chandra Sekhar Pedamallu; Isidro Cortes Ciriano; Fiona Behan; Lykourgos-Panagiotis Zalmas; Andrew Barthorpe; Hayley Francies; Steve Rowley; Jack Pollard; Pedro Beltrao; ...More
PUBLISHED: 2024, SOURCE: Cancer Cell, VOLUME: 42, ISSUE: 2
AUTHORS: Clare Pacini; Emma Duncan; Gonçalves, Emanuel; James Gilbert; Shriram Bhosle; Stuart Horswell; Emre Karakoc; Howard Lightfoot; Ed Curry; Francesc Muyas; Monsif Bouaboula; Chandra Sekhar Pedamallu; Isidro Cortes Ciriano; Fiona Behan; Lykourgos-Panagiotis Zalmas; Andrew Barthorpe; Hayley Francies; Steve Rowley; Jack Pollard; Pedro Beltrao; ...More
PUBLISHED: 2024, SOURCE: Cancer Cell, VOLUME: 42, ISSUE: 2
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TITLE: Genetic interaction library screening with a next-generation dual guide CRISPR system
AUTHORS: Thomas Burgold; Emre Karakoc; Gonçalves, Emanuel; Lisa Dwane; Inigo Barrio-Hernandez; Romina Oliveira Silva; Emily Souster; Mamta Sharma; Alexandra Beck; Gene Koh; Lykourgos-Panagiotis Zalmas; Mathew Garnett; Andrew Bassett;
PUBLISHED: 2024
AUTHORS: Thomas Burgold; Emre Karakoc; Gonçalves, Emanuel; Lisa Dwane; Inigo Barrio-Hernandez; Romina Oliveira Silva; Emily Souster; Mamta Sharma; Alexandra Beck; Gene Koh; Lykourgos-Panagiotis Zalmas; Mathew Garnett; Andrew Bassett;
PUBLISHED: 2024
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TITLE: Synthetic augmentation of cancer cell line multi-omic datasets using unsupervised deep learning
AUTHORS: Cai, Zhaoxiang; Apolinario, Sofia; Baiao, Ana R.; Pacini, Clare; Sousa, Miguel D.; Vinga, Susana; Reddel, Roger R.; Robinson, Phillip J.; Garnett, Mathew J.; Zhong, Qing; Gonçalves, Emanuel;
PUBLISHED: 2024, SOURCE: NATURE COMMUNICATIONS, VOLUME: 15, ISSUE: 1
AUTHORS: Cai, Zhaoxiang; Apolinario, Sofia; Baiao, Ana R.; Pacini, Clare; Sousa, Miguel D.; Vinga, Susana; Reddel, Roger R.; Robinson, Phillip J.; Garnett, Mathew J.; Zhong, Qing; Gonçalves, Emanuel;
PUBLISHED: 2024, SOURCE: NATURE COMMUNICATIONS, VOLUME: 15, ISSUE: 1
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TITLE: Base editing screens map mutations affecting interferon-y signaling in cancer
AUTHORS: Coelho, Matthew A.; Cooper, Sarah; Strauss, Magdalena E.; Karakoc, Emre; Bhosle, Shriram; Gonçalves, Emanuel; Picco, Gabriele; Burgold, Thomas; Cattaneo, Chiara M.; Veninga, Vivien; Consonni, Sarah; Dincer, Cansu; Vieira, Sara F.; Gibson, Freddy; Barthorpe, Syd; Hardy, Claire; Rein, Joel; Thomas, Mark; Marioni, John; Voest, Emile E.; ...More
PUBLISHED: 2023, SOURCE: CANCER CELL, VOLUME: 41, ISSUE: 2
AUTHORS: Coelho, Matthew A.; Cooper, Sarah; Strauss, Magdalena E.; Karakoc, Emre; Bhosle, Shriram; Gonçalves, Emanuel; Picco, Gabriele; Burgold, Thomas; Cattaneo, Chiara M.; Veninga, Vivien; Consonni, Sarah; Dincer, Cansu; Vieira, Sara F.; Gibson, Freddy; Barthorpe, Syd; Hardy, Claire; Rein, Joel; Thomas, Mark; Marioni, John; Voest, Emile E.; ...More
PUBLISHED: 2023, SOURCE: CANCER CELL, VOLUME: 41, ISSUE: 2
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TITLE: The pharmacoepigenomic landscape of cancer cell lines reveals the epigenetic component of drug sensitivity
AUTHORS: AJ Ohnmacht; Rajamani, A; Avar, G; Kutkaite, G; Gonçalves, Emanuel; Saur, D; MP Menden;
PUBLISHED: 2023
AUTHORS: AJ Ohnmacht; Rajamani, A; Avar, G; Kutkaite, G; Gonçalves, Emanuel; Saur, D; MP Menden;
PUBLISHED: 2023
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TITLE: DNA methylation fingerprint of hepatocellular carcinoma from tissue and liquid biopsies Full Text
AUTHORS: Gonçalves, Emanuel; Gonçalves Reis, M; Pereira Leal, JB; Cardoso, J;
PUBLISHED: 2022, SOURCE: Scientific Reports, VOLUME: 12, ISSUE: 1
AUTHORS: Gonçalves, Emanuel; Gonçalves Reis, M; Pereira Leal, JB; Cardoso, J;
PUBLISHED: 2022, SOURCE: Scientific Reports, VOLUME: 12, ISSUE: 1
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TITLE: Pan-cancer proteomic map of 949 human cell lines reveals principles of cancer vulnerabilities
AUTHORS: Gonçalves, Emanuel; Rebecca C Poulos; Zhaoxiang Cai; Syd Barthorpe; Srikanth S Manda; Natasha Lucas; Alexandra Beck; Daniel Bucio-Noble; Michael Dausmann; Caitlin Hall; Michael Hecker; Jennifer Koh; Sadia Mahboob; Iman Mali; James Morris; Laura Richardson; Akila J Seneviratne; Erin Sykes; Frances Thomas; Sara Valentini; ...More
PUBLISHED: 2022
AUTHORS: Gonçalves, Emanuel; Rebecca C Poulos; Zhaoxiang Cai; Syd Barthorpe; Srikanth S Manda; Natasha Lucas; Alexandra Beck; Daniel Bucio-Noble; Michael Dausmann; Caitlin Hall; Michael Hecker; Jennifer Koh; Sadia Mahboob; Iman Mali; James Morris; Laura Richardson; Akila J Seneviratne; Erin Sykes; Frances Thomas; Sara Valentini; ...More
PUBLISHED: 2022
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TITLE: Pan-cancer proteomic map of 949 human cell lines
AUTHORS: Gonçalves, Emanuel; Rebecca C Poulos; Zhaoxiang Cai; Syd Barthorpe; Srikanth S Manda; Natasha Lucas; Alexandra Beck; Daniel Bucio-Noble; Michael Dausmann; Caitlin Hall; Michael Hecker; Jennifer Koh; Howard Lightfoot; Sadia Mahboob; Iman Mali; James Morris; Laura Richardson; Akila J Seneviratne; Rebecca Shepherd; Erin Sykes; ...More
PUBLISHED: 2022, SOURCE: Cancer Cell, VOLUME: 40, ISSUE: 8
AUTHORS: Gonçalves, Emanuel; Rebecca C Poulos; Zhaoxiang Cai; Syd Barthorpe; Srikanth S Manda; Natasha Lucas; Alexandra Beck; Daniel Bucio-Noble; Michael Dausmann; Caitlin Hall; Michael Hecker; Jennifer Koh; Howard Lightfoot; Sadia Mahboob; Iman Mali; James Morris; Laura Richardson; Akila J Seneviratne; Rebecca Shepherd; Erin Sykes; ...More
PUBLISHED: 2022, SOURCE: Cancer Cell, VOLUME: 40, ISSUE: 8
