João Vieira Rodrigues
AuthID: R-000-7G4
1
TITLE: Development of antibacterial compounds that constrain evolutionary pathways to resistance
AUTHORS: Yanmin Zhang; Sourav Chowdhury; João V Rodrigues; Eugene Shakhnovich;
PUBLISHED: 2021, SOURCE: eLife, VOLUME: 10
AUTHORS: Yanmin Zhang; Sourav Chowdhury; João V Rodrigues; Eugene Shakhnovich;
PUBLISHED: 2021, SOURCE: eLife, VOLUME: 10
2
TITLE: Chimeric dihydrofolate reductases display properties of modularity and biophysical diversity
AUTHORS: João V Rodrigues; Brandon B Ogbunugafor; Daniel L Hartl; Eugene I Shakhnovich;
PUBLISHED: 2019, SOURCE: Protein Science, VOLUME: 28, ISSUE: 7
AUTHORS: João V Rodrigues; Brandon B Ogbunugafor; Daniel L Hartl; Eugene I Shakhnovich;
PUBLISHED: 2019, SOURCE: Protein Science, VOLUME: 28, ISSUE: 7
3
TITLE: Proteostasis environment shapes higher-order epistasis operating on antibiotic resistance
AUTHORS: Rafael F Guerrero; Samuel V Scarpino; João V Rodrigues; Daniel L Hartl; Brandon B Ogbunugafor;
PUBLISHED: 2019, SOURCE: Genetics, VOLUME: 212, ISSUE: 2
AUTHORS: Rafael F Guerrero; Samuel V Scarpino; João V Rodrigues; Daniel L Hartl; Brandon B Ogbunugafor;
PUBLISHED: 2019, SOURCE: Genetics, VOLUME: 212, ISSUE: 2
4
TITLE: Adaptation to mutational inactivation of an essential gene converges to an accessible suboptimal fitness peak
AUTHORS: João V Rodrigues; Eugene I Shakhnovich;
PUBLISHED: 2019, SOURCE: eLife, VOLUME: 8
AUTHORS: João V Rodrigues; Eugene I Shakhnovich;
PUBLISHED: 2019, SOURCE: eLife, VOLUME: 8
5
TITLE: Stability of the influenza virus hemagglutinin protein correlates with evolutionary dynamics
AUTHORS: Eili Y Klein; Deena Blumenkrantz; Adrian Serohijos; Eugene Shakhnovich; Jeong Mo Choi; João V Rodrigues; Brendan D Smith; Andrew P Lane; Andrew Feldman; Andrew Pekosz;
PUBLISHED: 2018, SOURCE: mSphere, VOLUME: 3, ISSUE: 1
AUTHORS: Eili Y Klein; Deena Blumenkrantz; Adrian Serohijos; Eugene Shakhnovich; Jeong Mo Choi; João V Rodrigues; Brendan D Smith; Andrew P Lane; Andrew Feldman; Andrew Pekosz;
PUBLISHED: 2018, SOURCE: mSphere, VOLUME: 3, ISSUE: 1
6
TITLE: Differential Enzyme Flexibility Probed Using Solid-State Nanopores
AUTHORS: Rui Hu; João V Rodrigues; Pradeep Waduge; Hirohito Yamazaki; Benjamin Cressiot; Yasmin Chishti; Lee Makowski; Dapeng Yu; Eugene Shakhnovich; Qing Zhao; Meni Wanunu;
PUBLISHED: 2018, SOURCE: ACS Nano, VOLUME: 12, ISSUE: 5
AUTHORS: Rui Hu; João V Rodrigues; Pradeep Waduge; Hirohito Yamazaki; Benjamin Cressiot; Yasmin Chishti; Lee Makowski; Dapeng Yu; Eugene Shakhnovich; Qing Zhao; Meni Wanunu;
PUBLISHED: 2018, SOURCE: ACS Nano, VOLUME: 12, ISSUE: 5
7
TITLE: Correction to: Rational Design of Novel Allosteric Dihydrofolate Reductase Inhibitors Showing Antibacterial Effects on Drug-Resistant Escherichia coli Escape Variants (ACS Chemical Biology (2017) 12:7 (1848-1857) DOI: 10.1021/acschembio.7b00175))
AUTHORS: Bharath Srinivasan; Joao V Rodrigues; Sam Tonddast Navaei; Eugene Shakhnovich; Jeffrey Skolnick;
PUBLISHED: 2018, SOURCE: ACS Chemical Biology, VOLUME: 13, ISSUE: 5
AUTHORS: Bharath Srinivasan; Joao V Rodrigues; Sam Tonddast Navaei; Eugene Shakhnovich; Jeffrey Skolnick;
PUBLISHED: 2018, SOURCE: ACS Chemical Biology, VOLUME: 13, ISSUE: 5
8
TITLE: Evolution on the biophysical fitness landscape of an RNA virus
AUTHORS: Assaf Rotem; Adrian W R Serohijos; Connie B Chang; Joshua T Wolfe; Audrey E Fischer; Thomas S Mehoke; Huidan Zhang; Ye Tao; Lloyd Ung W.; Jeong Mo Choi; João V Rodrigues; Abimbola O Kolawole; Stephan A Koehler; Susan Wu; Peter M Thielen; Naiwen Cui; Plamen A Demirev; Nicholas S Giacobbi; Timothy R Julian; Kellogg Schwab; ...More
PUBLISHED: 2018, SOURCE: Molecular Biology and Evolution, VOLUME: 35, ISSUE: 10
AUTHORS: Assaf Rotem; Adrian W R Serohijos; Connie B Chang; Joshua T Wolfe; Audrey E Fischer; Thomas S Mehoke; Huidan Zhang; Ye Tao; Lloyd Ung W.; Jeong Mo Choi; João V Rodrigues; Abimbola O Kolawole; Stephan A Koehler; Susan Wu; Peter M Thielen; Naiwen Cui; Plamen A Demirev; Nicholas S Giacobbi; Timothy R Julian; Kellogg Schwab; ...More
PUBLISHED: 2018, SOURCE: Molecular Biology and Evolution, VOLUME: 35, ISSUE: 10
9
TITLE: Proteostasis environment shapes higher-order epistasis operating on antibiotic resistance
AUTHORS: Rafael F Guerrero; Samuel V Scarpino; João V Rodrigues; Daniel L Hartl; Brandon B Ogbunugafor;
PUBLISHED: 2018
AUTHORS: Rafael F Guerrero; Samuel V Scarpino; João V Rodrigues; Daniel L Hartl; Brandon B Ogbunugafor;
PUBLISHED: 2018
10
TITLE: Rational Design of Novel Allosteric Dihydrofolate Reductase Inhibitors Showing Antibacterial Effects on Drug-Resistant <i>Escherichia coli</i> Escape Variants
AUTHORS: Srinivasan, B; Rodrigues, JV; Tonddast Navaei, S; Shakhnovich, E; Skolnick, J;
PUBLISHED: 2017, SOURCE: ACS CHEMICAL BIOLOGY, VOLUME: 12, ISSUE: 7
AUTHORS: Srinivasan, B; Rodrigues, JV; Tonddast Navaei, S; Shakhnovich, E; Skolnick, J;
PUBLISHED: 2017, SOURCE: ACS CHEMICAL BIOLOGY, VOLUME: 12, ISSUE: 7
