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Nuno Alberto Paulino da Fonseca
AuthID:
R-000-DK8
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Publicações
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Document Type:
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Article (73)
Proceedings Paper (22)
Unpublished (14)
Correction (3)
Data Paper (3)
Book Chapter (2)
Review (1)
Article in Press (1)
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Publicações Confirmadas: 119
11
TÃTULO:
Evaluating the impact of sampling strategies and bioinformatics on ethanol-based DNA metabarcoding
AUTORES:
Filipa MS Martins
;
Nuno A Fonseca
;
Bastian Egeter
; Joana Pinto; Tiago Assunção; Cátia Chaves; Pedro Sousa; Joaquim Jesus; Pedro Beja;
PUBLICAÇÃO:
2021
,
FONTE:
ARPHA Conference Abstracts,
VOLUME:
4
INDEXADO EM:
CrossRef
NO MEU:
ORCID
12
TÃTULO:
Metabarcoding with MinION: Speeding up the detection of invasive aquatic species using environmental DNA and nanopore sequencing
AUTORES:
Bastian Egeter
; Joana Veríssimo;
Manuel Lopes-Lima
; catia chaves; Joana Pinto; Nicoletta Riccardi; Pedro Beja;
Nuno A Fonseca
;
PUBLICAÇÃO:
2021
,
FONTE:
ARPHA Conference Abstracts,
VOLUME:
4
INDEXADO EM:
CrossRef
NO MEU:
ORCID
13
TÃTULO:
Selection underlies phenotypic divergence in the insular Azores woodpigeon
Full Text
AUTORES:
Andrade, P
; Cataldo, D; Fontaine, R;
Rodrigues, TM
;
Queiros, J
;
Neves, V
;
Fonseca, A
;
Carneiro, M
;
Goncalves, D
;
PUBLICAÇÃO:
2021
,
FONTE:
ZOOLOGICA SCRIPTA,
VOLUME:
50,
NÚMERO:
1
INDEXADO EM:
Scopus
WOS
CrossRef
:
2
NO MEU:
ORCID
14
TÃTULO:
Shedding Light on the African Enigma: In Vitro Testing of Homo sapiens-Helicobacter pylori Coevolution
AUTORES:
Cavadas, B;
Leite, M
;
Pedro, N
; Magalhaes, AC;
Melo, J
;
Correia, M
;
Maximo, V
;
Camacho, R
;
Fonseca, NA
;
Figueiredo, C
;
Pereira, L
;
PUBLICAÇÃO:
2021
,
FONTE:
MICROORGANISMS,
VOLUME:
9,
NÚMERO:
2
INDEXADO EM:
Scopus
WOS
CrossRef
:
9
NO MEU:
ORCID
15
TÃTULO:
Tumour gene expression signature in primary melanoma predicts long-term outcomes
AUTORES:
Garg, M; Couturier, DL; Nsengimana, J;
Fonseca, NA
; Wongchenko, M; Yan, YB; Lauss, M; Jonsson, GB; Newton Bishop, J; Parkinson, C; Middleton, MR; Bishop, DT; McDonald, S; Stefanos, N; Tadross, J; Vergara, IA; Lo, S; Newell, F; Wilmott, JS; Thompson, JF;
Long, GV;
Scolyer, RA;
Corrie, P;
Adams, DJ;
Brazma, A;
Rabbie, R;
...Mais
PUBLICAÇÃO:
2021
,
FONTE:
NATURE COMMUNICATIONS,
VOLUME:
12,
NÚMERO:
1
INDEXADO EM:
Scopus
WOS
CrossRef
:
30
NO MEU:
ORCID
16
TÃTULO:
A user guide for the online exploration and visualization of PCAWG data
AUTORES:
Mary J Goldman; Junjun Zhang;
Nuno A Fonseca
; Isidro Cortés-Ciriano; Qian Xiang; Brian Craft; Elena Piñeiro-Yáñez; Brian D O’Connor; Wojciech Bazant; Elisabet Barrera; Alfonso Muñoz-Pomer; Robert Petryszak; Anja Füllgrabe; Fatima Al-Shahrour; Maria Keays; David Haussler; John N Weinstein; Wolfgang Huber; Alfonso Valencia; Peter J Park;
Irene Papatheodorou;
Jingchun Zhu;
Vincent Ferretti;
Miguel Vazquez;
...Mais
PUBLICAÇÃO:
2020
,
FONTE:
Nature Communications,
VOLUME:
11,
NÚMERO:
1
INDEXADO EM:
CrossRef
:
20
NO MEU:
ORCID
17
TÃTULO:
An RNA-seq Based Machine Learning Approach Identifies Latent Tuberculosis Patients With an Active Tuberculosis Profile
Full Text
AUTORES:
Estévez, O; Anibarro, L; Garet, E; Pallares, Á; Barcia, L; Calviño, L; Maueia, C; Mussá, T; Fdez Riverola, F; Glez Peña, D; Reboiro Jato, M; López Fernández, H;
Fonseca, NA
; Reljic, R;
González Fernández, Á
;
PUBLICAÇÃO:
2020
,
FONTE:
Frontiers in Immunology,
VOLUME:
11
INDEXADO EM:
Scopus
CrossRef
:
25
NO MEU:
ORCID
18
TÃTULO:
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes
Full Text
AUTORES:
Esther Rheinbay
; PCAWG Drivers and Functional Interpretation Working Group, ; Morten Muhlig Nielsen; Federico Abascal; Jeremiah A Wala;
Ofer Shapira
; Grace Tiao; Henrik Hornshøj; Julian M Hess; Randi Istrup Juul; Ziao Lin;
Lars Feuerbach
;
Radhakrishnan Sabarinathan
; Tobias Madsen; Jaegil Kim; Loris Mularoni; Shimin Shuai; Andrés Lanzós; Carl Herrmann;
Yosef E Maruvka
;
Ciyue Shen;
Samirkumar B Amin;
Pratiti Bandopadhayay
;
Johanna Bertl;
Keith A Boroevich
;
John Busanovich;
Joana Carlevaro-Fita;
Dimple Chakravarty;
Calvin Wing Yiu Chan;
David Craft;
Priyanka Dhingra;
Klev Diamanti
;
Nuno A Fonseca
;
Abel Gonzalez-Perez;
Qianyun Guo
;
Mark P Hamilton;
Nicholas J Haradhvala
;
Chen Hong;
Keren Isaev;
Todd A Johnson;
Malene Juul;
Andre Kahles;
Abdullah Kahraman;
Youngwook Kim;
Jan Komorowski
;
Kiran Kumar;
Sushant Kumar
;
Donghoon Lee
;
Kjong-Van Lehmann;
Yilong Li;
Eric Minwei Liu;
Lucas Lochovsky;
Keunchil Park
;
Oriol Pich;
Nicola D Roberts;
Gordon Saksena;
Steven E Schumacher;
Nikos Sidiropoulos;
Lina Sieverling;
Nasa Sinnott-Armstrong;
Chip Stewart;
David Tamborero;
Jose M C Tubio;
Husen M Umer;
Liis Uusküla-Reimand
;
Claes Wadelius
;
Lina Wadi
;
Xiaotong Yao;
Cheng-Zhong Zhang;
Jing Zhang;
James E Haber;
Asger Hobolth
;
Marcin Imielinski;
Manolis Kellis
;
Michael S Lawrence;
Christian von Mering;
Hidewaki Nakagawa;
Benjamin J Raphael;
Mark A Rubin;
Chris Sander;
Lincoln D Stein
;
Joshua M Stuart;
Tatsuhiko Tsunoda;
David A Wheeler;
Rory Johnson;
Jüri Reimand;
Mark Gerstein;
Ekta Khurana;
Peter J Campbell
;
Núria López-Bigas
;
Joachim Weischenfeldt
;
Rameen Beroukhim
;
Iñigo Martincorena
;
Jakob Skou Pedersen;
Gad Getz;
PCAWG Structural Variation Working Group, ;
PCAWG Consortium, ;
...Mais
PUBLICAÇÃO:
2020
,
FONTE:
Nat.,
VOLUME:
578,
NÚMERO:
7793
INDEXADO EM:
Scopus
DBLP
CrossRef
:
396
NO MEU:
ORCID
|
DBLP
19
TÃTULO:
Butler enables rapid cloud-based analysis of thousands of human genomes
Full Text
AUTORES:
Yakneen, S; Waszak, SM; Gertz, M; Korbel, JO; Aminou, B; Bartolome, J; Boroevich, KA; Boyce, R; Brooks, AN; Buchanan, A; Buchhalter, I; Butler, AP; Byrne, NJ; Cafferkey, A; Campbell, PJ; Chen, ZH; Cho, S; Choi, W; Clapham, P; Davis Dusenbery, BN;
De La Vega, FM;
Demeulemeester, J;
Dow, MT;
Dursi, LJ;
Eils, J;
Eils, R;
Ellrott, K;
Farcas, C;
Favero, F;
Fayzullaev, N;
Ferretti, V;
Flicek, P;
Fonseca, NA
;
Gelpi, JL;
Getz, G;
Gibson, B;
Grossman, RL;
Harismendy, O;
Heath, AP;
Heinold, MC;
Hess, JM;
Hofmann, O;
Hong, JH;
Hudson, TJ;
Hutter, B;
Hutter, CM;
Hubschmann, D;
Imoto, S;
Ivkovic, S;
Jeon, SH;
Jiao, W;
Jung, J;
Kabbe, R;
Kahles, A;
Kerssemakers, JNA;
Kim, HL;
Kim, H;
Kim, J;
Kim, Y;
Kleinheinz, K;
Koscher, M;
Koures, A;
Kovacevic, M;
Lawerenz, C;
Leshchiner, I;
Liu, J;
Livitz, D;
Mihaiescu, GL;
Mijalkovic, S;
Lazic, AM;
Miyano, S;
Miyoshi, N;
Nahal Bose, HK;
Nakagawa, H;
Nastic, M;
Newhouse, SJ;
Nicholson, J;
O'Connor, BD;
Ocana, D;
Ohi, K;
Ohno Machado, L;
Omberg, L;
Ouellette, BFF;
Paramasivam, N;
Perry, MD;
Pihl, TD;
Prinz, M;
Puiggros, M;
Radovic, P;
Raine, KM;
Rheinbay, E;
Rosenberg, M;
Royo, R;
Ratsch, G;
Saksena, G;
Schlesner, M;
Shorser, SI;
Short, C;
Sofia, HJ;
Spring, J;
Stein, LD;
Struck, AJ;
Tiao, G;
Tijanic, N;
Torrents, D;
Van Loo, P;
Vazquez, M;
Vicente, D;
Wala, JA;
Wang, ZN;
Weischenfeldt, J;
Werner, J;
Williams, A;
Woo, Y;
Wright, AJ;
Xiang, Q;
Yang, LM;
Yuen, D;
Yung, CK;
Zhang, JJ;
...Mais
PUBLICAÇÃO:
2020
,
FONTE:
NATURE BIOTECHNOLOGY,
VOLUME:
38,
NÚMERO:
3
INDEXADO EM:
Scopus
WOS
CrossRef
:
8
NO MEU:
ORCID
20
TÃTULO:
Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis
AUTORES:
Carlevaro Fita, J; Lanzós, A; Feuerbach, L; Hong, C; Mas Ponte, D; Pedersen, JS; Abascal, F; Amin, SB; Bader, GD; Barenboim, J; Beroukhim, R; Bertl, J; Boroevich, KA; Brunak, S; Campbell, PJ; Carlevaro Fita, J; Chakravarty, D; Chan, CWY; Chen, K; Choi, JK;
Deu Pons, J;
Dhingra, P;
Diamanti, K;
Feuerbach, L;
Fink, JL;
Fonseca, NA
;
Frigola, J;
Gambacorti Passerini, C;
Garsed, DW;
Gerstein, M;
Getz, G;
Gonzalez Perez, A;
Guo, Q;
Gut, IG;
Haan, D;
Hamilton, MP;
Haradhvala, NJ;
Harmanci, AO;
Helmy, M;
Herrmann, C;
Hess, JM;
Hobolth, A;
Hodzic, E;
Hong, C;
Hornshøj, H;
Isaev, K;
Izarzugaza, JMG;
Johnson, R;
Johnson, TA;
Juul, M;
Juul, RI;
Kahles, A;
Kahraman, A;
Kellis, M;
Khurana, E;
Kim, J;
Kim, JK;
Kim, Y;
Komorowski, J;
Korbel, JO;
Kumar, S;
Lanzós, A;
Larsson, E;
Lawrence, MS;
Lee, D;
Lehmann, KV;
Li, S;
Li, X;
Lin, Z;
Liu, EM;
Lochovsky, L;
Lou, S;
Madsen, T;
Marchal, K;
Martincorena, I;
Martinez Fundichely, A;
Maruvka, YE;
McGillivray, PD;
Meyerson, W;
Muiños, F;
Mularoni, L;
Nakagawa, H;
Nielsen, MM;
Paczkowska, M;
Park, K;
Park, K;
Pedersen, JS;
Pich, O;
Pons, T;
Pulido Tamayo, S;
Raphael, BJ;
Reimand, J;
Reyes Salazar, I;
Reyna, MA;
Rheinbay, E;
Rubin, MA;
Rubio Perez, C;
Sabarinathan, R;
Sahinalp, SC;
Saksena, G;
Salichos, L;
Sander, C;
Schumacher, SE;
Shackleton, M;
Shapira, O;
Shen, C;
Shrestha, R;
Shuai, S;
Sidiropoulos, N;
Sieverling, L;
Sinnott Armstrong, N;
Stein, LD;
Stuart, JM;
Tamborero, D;
Tiao, G;
Tsunoda, T;
Umer, HM;
Uusküla Reimand, L;
Valencia, A;
Vazquez, M;
Verbeke, LPC;
Wadelius, C;
Wadi, L;
Wang, J;
Warrell, J;
Waszak, SM;
Weischenfeldt, J;
Wheeler, DA;
Wu, G;
Yu, J;
Zhang, J;
Zhang, X;
Zhang, Y;
Zhao, Z;
Zou, L;
von Mering, C;
Johnson, R;
...Mais
PUBLICAÇÃO:
2020
,
FONTE:
COMMUNICATIONS BIOLOGY,
VOLUME:
3,
NÚMERO:
1
INDEXADO EM:
Scopus
WOS
CrossRef
:
129
NO MEU:
ORCID
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