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Pedro Gabriel Dias Ferreira
AuthID:
R-000-ERJ
Publicações
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Document Type:
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Article (50)
Proceedings Paper (11)
Book Chapter (4)
Correction (3)
Unpublished (3)
Editorial Material (2)
Letter (1)
Book (1)
Phd Thesis (1)
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Publicações Confirmadas: 76
51
TÃTULO:
Sporadic and reversible chromothripsis in chronic lymphocytic leukemia revealed by longitudinal genomic analysis
Full Text
AUTORES:
Bassaganyas, L; Beà, S; Escaramís, G; Tornador, C; Salaverria, I; Zapata, L; Drechsel, O;
Ferreira, PG
; Rodriguez Santiago, B; Tubio, JMC; Navarro, A; Martín García, D; López, C; Martínez Trillos, A; López Guillermo, A; Gut, M; Ossowski, S; López Otín, C; Campo, E; Estivill, X;
PUBLICAÇÃO:
2013
,
FONTE:
Leukemia,
VOLUME:
27,
NÚMERO:
12
INDEXADO EM:
Scopus
CrossRef
:
26
NO MEU:
ORCID
|
CIÊNCIAVITAE
52
TÃTULO:
Transcriptome analyses of primitively eusocial wasps reveal novel insights into the evolution of sociality and the origin of alternative phenotypes
AUTORES:
Pedro G Ferreira
; Solenn Patalano; Ritika Chauhan; Richard Ffrench Constant; Toni Gabaldon;
Roderic Guigo
; Seirian Sumner;
PUBLICAÇÃO:
2013
,
FONTE:
GENOME BIOLOGY,
VOLUME:
14,
NÚMERO:
2
INDEXADO EM:
Scopus
WOS
CrossRef
:
128
NO MEU:
ORCID
|
CIÊNCIAVITAE
53
TÃTULO:
Transcriptome and genome sequencing uncovers functional variation in humans
Full Text
AUTORES:
Tuuli Lappalainen
;
Michael Sammeth
; Marc R Friedländer;
Peter A C ‘t Hoen
; Jean Monlong; Manuel A Rivas; Mar Gonzàlez-Porta; Natalja Kurbatova; Thasso Griebel;
Pedro G Ferreira
; Matthias Barann; Thomas Wieland; Liliana Greger; Maarten van Iterson; Jonas Almlöf; Paolo Ribeca; Irina Pulyakhina; Daniela Esser; Thomas Giger; Andrew Tikhonov;
Marc Sultan;
Gabrielle Bertier;
Daniel G MacArthur;
Monkol Lek;
Esther Lizano;
Henk P J Buermans;
Ismael Padioleau;
Thomas Schwarzmayr;
Olof Karlberg;
Halit Ongen;
Helena Kilpinen;
Sergi Beltran;
Marta Gut;
Katja Kahlem;
Vyacheslav Amstislavskiy;
Oliver Stegle;
Matti Pirinen;
Stephen B Montgomery;
Peter Donnelly;
Mark I McCarthy;
Paul Flicek;
Tim M Strom;
The Geuvadis Consortium, ;
Hans Lehrach;
Stefan Schreiber;
Ralf Sudbrak;
Ángel Carracedo;
Stylianos E Antonarakis;
Robert Häsler;
Ann-Christine Syvänen;
Gert-Jan van Ommen;
Alvis Brazma;
Thomas Meitinger;
Philip Rosenstiel;
Roderic Guigó;
Ivo G Gut;
Xavier Estivill;
Emmanouil T Dermitzakis;
...Mais
PUBLICAÇÃO:
2013
,
FONTE:
NATURE,
VOLUME:
501,
NÚMERO:
7468
INDEXADO EM:
Scopus
WOS
CrossRef
:
1677
NO MEU:
ORCID
|
ResearcherID
|
CIÊNCIAVITAE
54
TÃTULO:
An integrated encyclopedia of DNA elements in the human genome
Full Text
AUTORES:
Ian Dunham; Anshul Kundaje; Shelley F Aldred; Patrick J Collins; CarrieA. Davis; Francis Doyle; Charles B Epstein; Seth Frietze; Jennifer Harrow; Rajinder Kaul; Jainab Khatun; Bryan R Lajoie; Stephen G Landt; Bum Kyu Lee; Florencia Pauli; Kate R Rosenbloom; Peter Sabo; Alexias Safi; Amartya Sanyal; Noam Shoresh;
Jeremy M Simon;
Lingyun Song;
Nathan D Trinklein;
Robert C Altshuler;
Ewan Birney;
James B Brown;
Chao Cheng;
Sarah Djebali;
Xianjun J Dong;
Ian Dunham;
Jason Ernst;
Terrence S Furey;
Mark Gerstein;
Belinda Giardine;
Melissa Greven;
Ross C Hardison;
Robert S Harris;
Javier Herrero;
Michael M Hoffman;
Sowmya Iyer;
Manolis Kellis;
Jainab Khatun;
Pouya Kheradpour;
Anshul Kundaje;
Timo Lassmann;
Qunhua H Li;
Xinying Lin;
Georgi K Marinov;
Angelika Merkel;
Ali Mortazavi;
Stephen C J Parker;
Timothy E Reddy;
Joel Rozowsky;
Felix Schlesinger;
Robert E Thurman;
Jie Wang;
Lucas D Ward;
Troy W Whitfield;
Steven P Wilder;
Weisheng Wu;
Hualin L S Xi;
Kevin Y Yip;
Jiali L Zhuang;
Bradley E Bernstein;
Ewan Birney;
Ian Dunham;
Eric D Green;
Chris Gunter;
Michael Snyder;
Michael J Pazin;
Rebecca F Lowdon;
Laura A L Dillon;
Leslie B Adams;
Caroline J Kelly;
Julia Zhang;
Judith R Wexler;
Eric D Green;
Peter J Good;
Elise A Feingold;
Bradley E Bernstein;
Ewan Birney;
Gregory E Crawford;
Job Dekker;
Laura Elnitski;
Peggy J Farnham;
Mark Gerstein;
Morgan C Giddings;
Thomas R Gingeras;
Eric D Green;
Roderic Guigo;
Ross C Hardison;
Timothy J Hubbard;
Manolis Kellis;
James J Kent;
Jason D Lieb;
Elliott H Margulies;
Richard M Myers;
Michael Snyder;
John A Stamatoyannopoulos;
Scott A Tenenbaum;
Zhiping P Weng;
Kevin P White;
Barbara Wold;
Jainab Khatun;
Yanbao Yu;
John Wrobel;
Brian A Risk;
Harsha P Gunawardena;
Heather C Kuiper;
Christopher W Maier;
Ling Xie;
Xian Chen;
Morgan C Giddings;
Bradley E Bernstein;
Charles B Epstein;
Noam Shoresh;
Jason Ernst;
Pouya Kheradpour;
Tarjei S Mikkelsen;
Shawn Gillespie;
Alon Goren;
Oren Ram;
Xiaolan L Zhang;
Li Wang;
Robbyn Issner;
Michael J Coyne;
Timothy Durham;
Manching Ku;
Thanh Truong;
Lucas D Ward;
Robert C Altshuler;
Matthew L Eaton;
Manolis Kellis;
Sarah Djebali;
Carrie A Davis;
Angelika Merkel;
Alex Dobin;
Timo Lassmann;
Ali Mortazavi;
Andrea Tanzer;
Julien Lagarde;
Wei Lin;
Felix Schlesinger;
Chenghai H Xue;
Georgi K Marinov;
Jainab Khatun;
Brian A Williams;
Chris Zaleski;
Joel Rozowsky;
Maik Roeder;
Felix Kokocinski;
Rehab F Abdelhamid;
Tyler Alioto;
Igor Antoshechkin;
Michael T Baer;
Philippe Batut;
Ian Bell;
Kimberly Bell;
Sudipto Chakrabortty;
Xian Chen;
Jacqueline Chrast;
Joao Curado;
Thomas Derrien;
Jorg Drenkow;
Erica Dumais;
Jackie Dumais;
Radha Duttagupta;
Megan Fastuca;
Kata Fejes Toth;
Pedro Ferreira
;
Sylvain Foissac;
Melissa J Fullwood;
Hui Gao;
David Gonzalez;
Assaf Gordon;
Harsha P Gunawardena;
Cedric Howald;
Sonali Jha;
Rory Johnson;
Philipp Kapranov;
Brandon King;
Colin Kingswood;
Guoliang L Li;
Oscar J Luo;
Eddie Park;
Jonathan B Preall;
Kimberly Presaud;
Paolo Ribeca;
Brian A Risk;
Daniel Robyr;
Xiaoan A Ruan;
Michael Sammeth;
Kuljeet Singh Sandhu;
Lorain Schaeffer;
Lei Hoon See;
Atif Shahab;
Jorgen Skancke;
Ana Maria Suzuki;
Hazuki Takahashi;
Hagen Tilgner;
Diane Trout;
Nathalie Walters;
Huaien E Wang;
John Wrobel;
Yanbao B Yu;
Yoshihide Hayashizaki;
Jennifer Harrow;
Mark Gerstein;
Timothy J Hubbard;
Alexandre Reymond;
Stylianos E Antonarakis;
Gregory J Hannon;
Morgan C Giddings;
Yijun J Ruan;
Barbara Wold;
Piero Carninci;
Roderic Guigo;
Thomas R Gingeras;
Kate R Rosenbloom;
Cricket A Sloan;
Katrina Learned;
Venkat S Malladi;
Matthew C Wong;
Galtp. Barber;
Melissa S Cline;
Timothy R Dreszer;
Steven G Heitner;
Donna Karolchik;
James J Kent;
Vanessa M Kirkup;
Laurence R Meyer;
Jeffrey C Long;
Morgan Maddren;
Brian J Raney;
Terrence S Furey;
Lingyun Y Song;
Linda L Grasfeder;
Paul G Giresi;
Bum Kyu Lee;
Anna Battenhouse;
Nathan C Sheffield;
Jeremy M Simon;
Kimberly A Showers;
Alexias Safi;
Darin London;
Akshay A Bhinge;
Christopher Shestak;
Matthew R Schaner;
Seul Ki Kim;
Zhuzhu Z Z Zhang;
Piotr A Mieczkowski;
Joanna O Mieczkowska;
Zheng Liu;
Ryan M McDaniell;
Yunyun Y Ni;
Naim U Rashid;
Min Jae Kim;
Sheera Adar;
Zhancheng C Zhang;
Tianyuan Y Wang;
Deborah Winter;
Damian Keefe;
Ewan Birney;
Vishwanath R Iyer;
Jason D Lieb;
Gregory E Crawford;
Guoliang L Li;
Kuljeet Singh Sandhu;
Meizhen Z Zheng;
Ping Wang;
Oscar J Luo;
Atif Shahab;
Melissa J Fullwood;
Xiaoan A Ruan;
Yijun J Ruan;
Richard M Myers;
Florencia Pauli;
Brian A Williams;
Jason Gertz;
Georgi K Marinov;
Timothy E Reddy;
Jost Vielmetter;
Christopher C Partridge;
Diane Trout;
Katherine E Varley;
Clarke Gasper;
Anita Bansal;
Shirley Pepke;
Preti Jain;
Henry Amrhein;
Kevin M Bowling;
Michael Anaya;
Marie K Cross;
Brandon King;
Michael A Muratet;
Igor Antoshechkin;
Kimberly M Newberry;
Kenneth Mccue;
Amy S Nesmith;
Katherine I Fisher Aylor;
Barbara Pusey;
Gilberto DeSalvo;
Stephanie L Parker;
Sreeram Balasubramanian;
Nicholas S Davis;
Sarah K Meadows;
Tracy Eggleston;
Chris Gunter;
Scott S Newberry;
Shawn E Levy;
Devin M Absher;
Ali Mortazavi;
Wing H Wong;
Barbara Wold;
Matthew J Blow;
Axel Visel;
Len A Pennachio;
Laura Elnitski;
Elliott H Margulies;
Stephen C J Parker;
Hanna M Petrykowska;
Alexej Abyzov;
Bronwen Aken;
Daniel Barrell;
Gemma Barson;
Andrew Berry;
Alexandra Bignell;
Veronika Boychenko;
Giovanni Bussotti;
Jacqueline Chrast;
Claire Davidson;
Thomas Derrien;
Gloria Despacio Reyes;
Mark Diekhans;
Iakes Ezkurdia;
Adam Frankish;
James Gilbert;
Jose Manuel Gonzalez;
Ed Griffiths;
Rachel Harte;
David A Hendrix;
Cedric Howald;
Toby Hunt;
Irwin Jungreis;
Mike Kay;
Ekta Khurana;
Felix Kokocinski;
Jing Leng;
Michael F Lin;
Jane Loveland;
Zhi Lu;
Deepa Manthravadi;
Marco Mariotti;
Jonathan Mudge;
Gaurab Mukherjee;
Cedric Notredame;
Baikang K Pei;
Jose Manuel Rodriguez;
Gary Saunders;
Andrea Sboner;
Stephen Searle;
Cristina Sisu;
Catherine Snow;
Charlie Steward;
Andrea Tanzer;
Electra Tapanari;
Michael L Tress;
Marijke J van Baren;
Nathalie Walters;
Stefan Washietl;
Laurens Wilming;
Amonida Zadissa;
Zhengdong D Zhang;
Michael Brent;
David Haussler;
Manolis Kellis;
Alfonso Valencia;
Mark Gerstein;
Alexandre Reymond;
Roderic Guigo;
Jennifer Harrow;
Timothy J Hubbard;
Stephen G Landt;
Seth Frietze;
Alexej Abyzov;
Nick Addleman;
Roger P Alexander;
Raymond K Auerbach;
Suganthi Balasubramanian;
Keith Bettinger;
Nitin Bhardwaj;
Alan P Boyle;
Alina R Cao;
Philip Cayting;
Alexandra Charos;
Yong Cheng;
Chao Cheng;
Catharine Eastman;
Ghia Euskirchen;
Joseph D Fleming;
Fabian Grubert;
Lukas Habegger;
Manoj Hariharan;
Arif Harmanci;
Sushma Iyengar;
Victor X Jin;
Konrad J Karczewski;
Maya Kasowski;
Phil Lacroute;
Hugo Lam;
Nathan Lamarre Vincent;
Jing Leng;
Jin Lian;
Marianne Lindahl Allen;
Renqiang Q Min;
Benoit Miotto;
Hannah Monahan;
Zarmik Moqtaderi;
Xinmeng M J Mu;
Henriette O'Geen;
Zhengqing Q Ouyang;
Dorrelyn Patacsil;
Baikang K Pei;
Debasish Raha;
Lucia Ramirez;
Brian Reed;
Joel Rozowsky;
Andrea Sboner;
Minyi Y Shi;
Cristina Sisu;
Teri Slifer;
Heather Witt;
Linfeng F Wu;
Xiaoqin Q Xu;
Koon Kiu Yan;
Xinqiong Q Yang;
Kevin Y Yip;
Zhengdong D Zhang;
Kevin Struhl;
Sherman M Weissman;
Mark Gerstein;
Peggy J Farnham;
Michael Snyder;
Scott A Tenenbaum;
Luiz O Penalva;
Francis Doyle;
Subhradip Karmakar;
Stephen G Landt;
Raj R Bhanvadia;
Alina Choudhury;
Marc Domanus;
Lijia J Ma;
Jennifer Moran;
Dorrelyn Patacsil;
Teri Slifer;
Alec Victorsen;
Xinqiong Q Yang;
Michael Snyder;
Kevin P White;
Thomas Auer;
Lazaro Centanin;
Michael Eichenlaub;
Franziska Gruhl;
Stephan Heermann;
Burkhard Hoeckendorf;
Daigo Inoue;
Tanja Kellner;
Stephan Kirchmaier;
Claudia Mueller;
Robert Reinhardt;
Lea Schertel;
Stephanie Schneider;
Rebecca Sinn;
Beate Wittbrodt;
Jochen Wittbrodt;
Zhiping P Weng;
Troy W Whitfield;
Jie Wang;
Patrick J Collins;
Shelley F Aldred;
Nathan D Trinklein;
Christopher C Partridge;
Richard M Myers;
Job Dekker;
Gaurav Jain;
Bryan R Lajoie;
Amartya Sanyal;
Gayathri Balasundaram;
Daniel L Bates;
Rachel Byron;
Theresa K Canfield;
Morgan J Diegel;
Douglas Dunn;
Abigail K Ebersol;
Tristan Frum;
Kavita Garg;
Erica Gist;
Scott S Hansen;
Lisa Boatman;
Eric Haugen;
Richard Humbert;
Gaurav Jain;
Audra K Johnson;
Ericka M Johnson;
Tattyana V Kutyavin;
Bryan R Lajoie;
Kristen Lee;
Dimitra Lotakis;
Matthew T Maurano;
Shane J Neph;
Fiedencio V Neri;
Eric D Nguyen;
Hongzhu Z Qu;
Alex P Reynolds;
Vaughn Roach;
Eric Rynes;
Peter Sabo;
Minerva E Sanchez;
Richard S Sandstrom;
Amartya Sanyal;
Anthony O Shafer;
Andrew B Stergachis;
Sean Thomas;
Robert E Thurman;
Benjamin Vernot;
Jeff Vierstra;
Shinny Vong;
Hao Wang;
Molly A Weaver;
Yongqi Q Yan;
Miaohua H Zhang;
Joshua M Akey;
Michael Bender;
Michael O Dorschner;
Mark Groudine;
Michael J MacCoss;
Patrick Navas;
George Stamatoyannopoulos;
Rajinder Kaul;
Job Dekker;
John A Stamatoyannopoulos;
Ian Dunham;
Kathryn Beal;
Alvis Brazma;
Paul Flicek;
Javier Herrero;
Nathan Johnson;
Damian Keefe;
Margus Lukk;
Nicholas M Luscombe;
Daniel Sobral
;
Juan M Vaquerizas;
Steven P Wilder;
Serafim Batzoglou;
Arend Sidow;
Nadine Hussami;
Sofia Kyriazopoulou Panagiotopoulou;
Max W Libbrecht;
Marc A Schaub;
Anshul Kundaje;
Ross C Hardison;
Webb Miller;
Belinda Giardine;
Robert S Harris;
Weisheng Wu;
Peter J Bickel;
Balazs Banfai;
Nathan P Boley;
James B Brown;
Haiyan Y Huang;
Qunhua H Li;
Jingyi Jessica Li;
William Stafford Noble;
Jeffrey A Bilmes;
Orion J Buske;
Michael M Hoffman;
Avinash D Sahu;
Peter V Kharchenko;
Peter J Park;
Dannon Baker;
James Taylor;
Zhiping P Weng;
Sowmya Iyer;
Xianjun J Dong;
Melissa Greven;
Xinying Y Lin;
Jie Wang;
Hualin L S Xi;
Jiali L Zhuang;
Mark Gerstein;
Roger P Alexander;
Suganthi Balasubramanian;
Chao Cheng;
Arif Harmanci;
Lucas Lochovsky;
Renqiang Min;
Xinmeng M J Mu;
Joel Rozowsky;
Koon Kiu Yan;
Kevin Y Yip;
Ewan Birney;
...Mais
PUBLICAÇÃO:
2012
,
FONTE:
NATURE,
VOLUME:
489,
NÚMERO:
7414
INDEXADO EM:
Scopus
WOS
CrossRef
:
14687
NO MEU:
ORCID
|
ResearcherID
|
CIÊNCIAVITAE
55
TÃTULO:
Detecting abnormal patterns in call graphs based on the aggregation of relevant vertex measures
AUTORES:
Alves, R
;
Ferreira, P
;
Ribeiro, J
;
Belo, O
;
PUBLICAÇÃO:
2012
,
FONTE:
12th Industrial Conference on Advances in Data Mining, ICDM 2012
in
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics),
VOLUME:
7377 LNAI
INDEXADO EM:
Scopus
DBLP
CrossRef
:
1
NO MEU:
ORCID
|
DBLP
|
CIÊNCIAVITAE
56
TÃTULO:
Landscape of transcription in human cells
Full Text
AUTORES:
Sarah Djebali; Carrie A Davis; Angelika Merkel;
Alex Dobin
; Timo Lassmann; Ali Mortazavi; Andrea Tanzer; Julien Lagarde;
Wei Lin
; Felix Schlesinger;
Chenghai H Xue
; Georgi K Marinov;
Jainab Khatun
; Brian A Williams; Chris Zaleski; Joel Rozowsky; Maik Roeder; Felix Kokocinski;
Rehab F Abdelhamid
;
Tyler Alioto
;
Igor Antoshechkin;
Michael T Baer;
Nadav S Bar;
Philippe Batut;
Kimberly Bell
;
Ian Bell;
Sudipto Chakrabortty
;
Xian Chen;
Jacqueline Chrast
;
Joao Curado;
Thomas Derrien;
Jorg Drenkow
;
Erica Dumais
;
Jacqueline Dumais
;
Radha Duttagupta
;
Emilie Falconnet;
Meagan Fastuca
;
Kata Fejes Toth
;
Pedro Ferreira
;
Sylvain Foissac;
Melissa J Fullwood
;
Hui Gao;
David Gonzalez;
Assaf Gordon
;
Harsha Gunawardena;
Cedric Howald;
Sonali Jha
;
Rory Johnson;
Philipp Kapranov
;
Brandon King
;
Colin Kingswood;
Oscar J Luo;
Eddie Park;
Kimberly Persaud;
Jonathan B Preall
;
Paolo Ribeca;
Brian Risk
;
Daniel Robyr
;
Michael Sammeth
;
Lorian Schaffer;
Lei Hoon See;
Atif Shahab;
Jorgen Skancke;
Ana Maria Suzuki;
Hazuki Takahashi;
Hagen Tilgner
;
Diane Trout;
Nathalie Walters;
Huaien Wang;
John Wrobel;
Yanbao B Yu;
Xiaoan A Ruan;
Yoshihide Hayashizaki;
Jennifer Harrow;
Mark Gerstein;
Tim Hubbard;
Alexandre Reymond;
Stylianos E Antonarakis;
Gregory Hannon;
Morgan C Giddings;
Yijun J Ruan
;
Barbara Wold
;
Piero Carninci
;
Roderic Guigo
;
Thomas R Gingeras
;
...Mais
PUBLICAÇÃO:
2012
,
FONTE:
NATURE,
VOLUME:
489,
NÚMERO:
7414
INDEXADO EM:
Scopus
WOS
CrossRef
:
4118
NO MEU:
ORCID
|
ResearcherID
|
CIÊNCIAVITAE
57
TÃTULO:
RNA secondary structure mediates alternative 3 ' ss selection in Saccharomyces cerevisiae
AUTORES:
Mireya Plass;
Carles Codony Servat
;
Pedro G Gabriel Ferreira
;
Josep Vilardell
; Eduardo Eyras;
PUBLICAÇÃO:
2012
,
FONTE:
RNA-A PUBLICATION OF THE RNA SOCIETY,
VOLUME:
18,
NÚMERO:
6
INDEXADO EM:
Scopus
WOS
CrossRef
:
35
NO MEU:
ORCID
|
ResearcherID
|
CIÊNCIAVITAE
58
TÃTULO:
Evolutionary patterns at the RNase based gametophytic self-incompatibility system in two divergent Rosaceae groups (Maloideae and Prunus)
Full Text
AUTORES:
Jorge Vieira
;
Pedro G Ferreira
;
Bruno Aguiar
;
Nuno A Fonseca
;
Cristina P Vieira
;
PUBLICAÇÃO:
2010
,
FONTE:
BMC EVOLUTIONARY BIOLOGY,
VOLUME:
10,
NÚMERO:
1
INDEXADO EM:
Scopus
WOS
CrossRef
:
24
NO MEU:
ORCID
|
CIÊNCIAVITAE
59
TÃTULO:
Mitotic cell-cycle progression is regulated by CPEB1 and CPEB4-dependent translational control
Full Text
AUTORES:
Isabel Novoa; Javier Gallego;
Pedro G Ferreira
; Raul Mendez;
PUBLICAÇÃO:
2010
,
FONTE:
NATURE CELL BIOLOGY,
VOLUME:
12,
NÚMERO:
5
INDEXADO EM:
Scopus
WOS
CrossRef
:
133
NO MEU:
ORCID
|
ResearcherID
|
CIÊNCIAVITAE
60
TÃTULO:
Deterministic Motif Mining in Protein Databases
AUTORES:
Pedro Gabriel Ferreira
;
Paulo J Azevedo
;
PUBLICAÇÃO:
2009
,
FONTE:
Database Technologies: Concepts, Methodologies, Tools, and Applications (4 Volumes)
INDEXADO EM:
DBLP
NO MEU:
DBLP
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