Marta Isabel Belchior Lopes


AuthID: R-000-D28

Confirmed Publications: 59



1
TITLE: A toolbox of machine learning software to support microbiome analysis  Full Text
AUTHORS: Marcos Zambrano, Laura Judith; Lopez Molina, Victor Manuel; Bakir Gungor, Burcu; Frohme, Marcus; Karaduzovic Hadziabdic, Kanita; Klammsteiner, Thomas; Ibrahimi, Eliana; Lahti, Leo; Loncar Turukalo, Tatjana; Dhamo, Xhilda; Simeon, Andrea; Nechyporenko, Alina; Pio, Gianvito; Przymus, Piotr; Sampri, Alexia; Trajkovik, Vladimir; Lacruz Pleguezuelos, Blanca; Aasmets, Oliver; Araujo, Ricardo; Anagnostopoulos, Ioannis; Aydemir, Oender; Berland, Magali; Calle, M. Luz; Ceci, Michelangelo; Duman, Hatice; Guendogdu, Aycan; Havulinna, Aki S.; Kaka Bra, Kardokh Hama Najib; Kalluci, Eglantina; Karav, Sercan; Lode, Daniel; Lopes, Marta B. ; May, Patrick; Nap, Bram; Nedyalkova, Miroslava; Paciencia, Ines; Pasic, Lejla; Pujolassos, Meritxell; Shigdel, Rajesh; Susin, Antonio; Thiele, Ines; Truica, Ciprian Octavian; Wilmes, Paul; Yilmaz, Ercument; Yousef, Malik; Claesson, Marcus Joakim; Truu, Jaak; Carrillo de Santa Pau, Enrique; ...More
PUBLISHED: 2023, SOURCE: FRONTIERS IN MICROBIOLOGY, VOLUME: 14
INDEXED IN: Scopus WOS Unpaywall
2
TITLE: Advancing microbiome research with machine learning: key findings from the ML4Microbiome COST action  Full Text
AUTHORS: Domenica D’Elia; Jaak Truu; Leo Lahti; Magali Berland; Georgios Papoutsoglou; Michelangelo Ceci; Aldert Zomer; Marta Lopes ; Eliana Ibrahimi; Aleksandra Gruca; Alina Nechyporenko; Marcus Frohme; Thomas Klammsteiner; Enrique Carrillo-de Santa Pau; Laura Judith Marcos Zambrano; Karel Hron; Gianvito Pio; Andrea Simeon; Ramona Suharoschi; Isabel Moreno Indias; Andriy Temko; Miroslava Nedyalkova; Elena-Simona Apostol; Ciprian-Octavian Truică; Rajesh Shigdel; Jasminka Hasić Telalović; Erik Bongcam Rudloff; Piotr Przymus; Naida Babić Jordamović; Laurent Falquet; Sonia Tarazona; Alexia Sampri; Gaetano Isola; David Pérez Serrano; Vladimir Trajkovik; Lubos Klucar; Tatjana Loncar Turukalo; Aki Havulinna; Christian Jansen; Randi Bertelsen; Marcus Joakim Claesson; ...More
PUBLISHED: 2023, SOURCE: Frontiers in Microbiology, VOLUME: 14
INDEXED IN: Scopus CrossRef: 1 Unpaywall
IN MY: ORCID
3
TITLE: Causal Graph Discovery for Explainable Insights on Marine Biotoxin Shellfish Contamination
AUTHORS: Diogo Ribeiro; Filipe Ferraz; Marta Lopes ; Susana Rodrigues; Pedro Reis Costa; Susana Vinga; Alexandra Carvalho;
PUBLISHED: 2023, SOURCE: 24th International Conference on Intelligent Data Engineering and Automated Learning, IDEAL 2023 in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), VOLUME: 14404 LNCS
INDEXED IN: Scopus CrossRef Unpaywall
IN MY: ORCID
4
TITLE: Disclosing transcriptomics network-based signatures of glioma heterogeneity using sparse methods  Full Text
AUTHORS: Martins, Sofia; Coletti, Roberta ; Lopes, Marta B. ;
PUBLISHED: 2023, SOURCE: BIODATA MINING, VOLUME: 16, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 1
IN MY: ORCID
5
TITLE: Evaluating the Causal Role of Environmental Data in Shellfish Biotoxin Contamination on the Portuguese Coast
AUTHORS: Ana Rita Baião; Carolina Peixoto; Marta Lopes ; Pedro Reis Costa; Alexandra Carvalho; Susana Vinga;
PUBLISHED: 2023, SOURCE: 22nd EPIA Conference on Artificial Intelligence, EPIA 2023 in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), VOLUME: 14116 LNAI
INDEXED IN: Scopus CrossRef Unpaywall
IN MY: ORCID
6
TITLE: Identification of biomarkers predictive of metastasis development in early-stage colorectal cancer using network-based regularization  Full Text
AUTHORS: Peixoto, Carolina; Lopes, Marta B. ; Martins, Marta; Casimiro, Sandra; Sobral, Daniel; Grosso, Ana Rita; Abreu, Catarina; Macedo, Daniela; Costa, Ana Lucia; Pais, Helena; Alvim, Cecilia; Mansinho, Andre; Filipe, Pedro; Costa, Pedro Marques da; Fernandes, Afonso; Borralho, Paula; Ferreira, Cristina; Malaquias, Joao; Quintela, Antonio; Kaplan, Shannon; Golkaram, Mahdi; Salmans, Michael; Khan, Nafeesa; Vijayaraghavan, Raakhee; Zhang, Shile; Pawlowski, Traci; Godsey, Jim; So, Alex; Liu, Li; Costa, Luis; Vinga, Susana; ...More
PUBLISHED: 2023, SOURCE: BMC BIOINFORMATICS, VOLUME: 24, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 6
IN MY: ORCID
7
TITLE: Machine learning approaches in microbiome research: challenges and best practices  Full Text
AUTHORS: Papoutsoglou, Georgios; Tarazona, Sonia; Lopes, Marta B. ; Klammsteiner, Thomas; Ibrahimi, Eliana; Eckenberger, Julia; Novielli, Pierfrancesco; Tonda, Alberto; Simeon, Andrea; Shigdel, Rajesh; Bereux, Stephane; Vitali, Giacomo; Tangaro, Sabina; Lahti, Leo; Temko, Andriy; Claesson, Marcus J.; Berland, Magali;
PUBLISHED: 2023, SOURCE: FRONTIERS IN MICROBIOLOGY, VOLUME: 14
INDEXED IN: Scopus WOS CrossRef: 3 Unpaywall
IN MY: ORCID
8
TITLE: Multi-omics Data Integration and Network Inference for Biomarker Discovery in Glioma
AUTHORS: Coletti, Roberta ; Lopes, Marta B. ;
PUBLISHED: 2023, SOURCE: 22nd EPIA Conference on Artificial Intelligence (EPIA) in PROGRESS IN ARTIFICIAL INTELLIGENCE, EPIA 2023, PT II, VOLUME: 14116
INDEXED IN: Scopus WOS CrossRef Unpaywall
IN MY: ORCID
9
TITLE: Overview of data preprocessing for machine learning applications in human microbiome research  Full Text
AUTHORS: Ibrahimi, Eliana; Lopes, Marta B. ; Dhamo, Xhilda; Simeon, Andrea; Shigdel, Rajesh; Hron, Karel; Stres, Blaz; D'Elia, Domenica; Berland, Magali; Marcos Zambrano, Laura Judith;
PUBLISHED: 2023, SOURCE: FRONTIERS IN MICROBIOLOGY, VOLUME: 14
INDEXED IN: Scopus WOS CrossRef Unpaywall
IN MY: ORCID
10
TITLE: Regularized Generalized Linear Models to Disclose Host-Microbiome Associations in Colorectal Cancer
AUTHORS: Eliana Ibrahimi; Mina Norouzirad ; Melisa Meto; Marta B Lopes ;
PUBLISHED: 2023, SOURCE: ACM International Conference Proceeding Series
INDEXED IN: Scopus CrossRef Unpaywall
IN MY: ORCID
Page 1 of 6. Total results: 59.

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