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TITLE: Merlin: Metabolic models reconstruction using genome-scale information
AUTHORS: Dias, O ; Rocha, M ; Ferreira, EC ; Rocha, I ;
PUBLISHED: 2010, SOURCE: 11th International Symposium on Computer Applications in Biotechnology, CAB 2010 in IFAC Proceedings Volumes (IFAC-PapersOnline), VOLUME: 11, ISSUE: PART 1

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TITLE: Metaheuristics for Strain Optimization Using Transcriptional Information Enriched Metabolic Models
AUTHORS: Vilaca, P; Maia, P; Rocha, I ; Rocha, M ;
PUBLISHED: 2010, SOURCE: 8th European Conference on Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics in EVOLUTIONARY COMPUTATION, MACHINE LEARNING AND DATA MINING IN BIOINFORMATICS, PROCEEDINGS, VOLUME: 6023

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TITLE: OptFlux: an open-source software platform for in silico metabolic engineering Full Text
AUTHORS: Isabel Rocha ; Paulo Maia; Pedro Evangelista; Paulo Vilaca; Simao Soares; Jose P Pinto ; Jens Nielsen; Kiran R Patil; Eugenio C Ferreira ; Miguel Rocha ;
PUBLISHED: 2010, SOURCE: BMC SYSTEMS BIOLOGY, VOLUME: 4, ISSUE: 1

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TITLE: Selection of elementary modes for bioprocess control
AUTHORS: Soons, ZITA; Ferreira, EC ; Rocha, I ;
PUBLISHED: 2010, SOURCE: 11th International Symposium on Computer Applications in Biotechnology, CAB 2010 in IFAC Proceedings Volumes (IFAC-PapersOnline), VOLUME: 11, ISSUE: PART 1

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TITLE: Virtual laboratories in (bio)chemical engineering education Full Text
AUTHORS: Domingues, L ; Rocha, I ; Dourado, F ; Alves, M ; Ferreira, EC ;
PUBLISHED: 2010, SOURCE: Education for Chemical Engineers, VOLUME: 5, ISSUE: 2

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TITLE: @Note: A workbench for Biomedical Text Mining Full Text
AUTHORS: Lourenco, A; Carreira, R; Carneiro, S ; Maia, P; Glez Pena, D; Fdez Riverola, F; Ferreira, EC ; Rocha, I ; Rocha, M ;
PUBLISHED: 2009, SOURCE: JOURNAL OF BIOMEDICAL INFORMATICS, VOLUME: 42, ISSUE: 4

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TITLE: A Critical Review on Modelling Formalisms and Simulation Tools in Computational Biosystems
AUTHORS: Daniel Machado; Rafael S Costa ; Miguel Rocha ; Isabel Rocha ; Bruce Tidor; Eugenio C Ferreira ;
PUBLISHED: 2009, SOURCE: 10th International Work-Conference on Artificial Neural Networks (IWANN 2009) in DISTRIBUTED COMPUTING, ARTIFICIAL INTELLIGENCE, BIOINFORMATICS, SOFT COMPUTING, AND AMBIENT ASSISTED LIVING, PT II, PROCEEDINGS, VOLUME: 5518, ISSUE: PART 2

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TITLE: A Dynamical Model for the Fermentative Production of Fructooligosaccharides
AUTHORS: Rocha, O; Nobre, C; Dominguez, A; Torres, Duarte ; Faria, N; Rodrigues, L ; Teixeira, JA ; Ferreira, EC ; Rocha, I ;
PUBLISHED: 2009, SOURCE: 10th International Symposium on Process Systems Engineering in 10TH INTERNATIONAL SYMPOSIUM ON PROCESS SYSTEMS ENGINEERING, VOLUME: 27, ISSUE: C

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TITLE: A Software Tool for the Simulation and Optimization of Dynamic Metabolic Models
AUTHORS: Pedro Evangelista; Isabel Rocha ; Eugenio C Ferreira ; Miguel Rocha ;
PUBLISHED: 2009, SOURCE: 10th International Work-Conference on Artificial Neural Networks (IWANN 2009) in DISTRIBUTED COMPUTING, ARTIFICIAL INTELLIGENCE, BIOINFORMATICS, SOFT COMPUTING, AND AMBIENT ASSISTED LIVING, PT II, PROCEEDINGS, VOLUME: 5518, ISSUE: PART 2

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